| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2871 |
|---|
| Symbol | |
|---|
| ID | 4958542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3117682 |
|---|
| End bp | 3118638 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640182052 |
|---|
| Product | cysteine synthase A |
|---|
| Protein accession | YP_001114200 |
|---|
| Protein GI | 134300704 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTTT ATAACAGTAT TTTAGAAACC ATTGGTCATA CCCCCCTGGT AAGGTTAAAT
AATATAACCA AAGGTCTGGC GGCTGAAGTG GTTGCCAAGG TGGAGTTTTT TAACCCTGGT
GGCAGTGCGA AGGATAGAAT TGCTTATGCC ATGATATCAG ATGCTTTACA ACATGGGTTT
ATCAACAAAG ACAGTGTTTT GATTGAACCA ACCAGTGGCA ATACCGGAGT AGGTTTGGCG
CTAACCTGTG CCTCCATGGG CATCAAGTTA ATTCTCACAA TGCCCGAAAC CATGAGCCAG
GAAAGACGTA GTCTACTGAA GGCCTATGGG GCAGAGATCG TATTAACTCC GGGTGCAGAT
GGGATGAGAG GAGCAATCGC TAAGGCCGAA GAATTAGCGG CAACAACAGA AAATTCTTTT
ATACCTCAGC AGTTTCGTAA CCCAGCAAAC CCAAGGGCCC ATGAAGAAAG TACAGGAGTT
GAAATTTGGG AAGACACCGG CGGCAAGGTG GATATTTTTG TTGCCGGTGT TGGTACAGGA
GGTACCATTA CAGGGATTAC TAAGTTCCTT AAAGCTAAAA ATGCATCACT CCAGGCCGTA
GCCGTAGAGC CAGCGGCTTC ACCGGTACTA TCCGGTGGCA AGCCGGGACC CCATCCCATT
CAAGGAATTG GCGCAGGGTT TATACCGGAG GTGCTAAACC TAAAAGTGGT CGATGAAGTC
TTTCAGGTAC CCGGGGACAA AGCCCTAGAA ACTGCTCGCA GACTGGCCCG AGAAGAAGGG
ATTTTAGTGG GCATATCCTC TGGTGCTGCC ATGTATGCAG CCTTGGAAGT GGCGCGTCGG
CCAGAGAATA ATGATAAGTT AGTGGTGGTT TTACTGCCTG ACACCGGGGA ACGTTATTTG
TCCACGGAAT TGTTTAAGGA AGAATTATCG AAGGAAAGTT TCCAGGCAAA TCAGTAA
|
|---|
| Protein sequence | MPVYNSILET IGHTPLVRLN NITKGLAAEV VAKVEFFNPG GSAKDRIAYA MISDALQHGF
INKDSVLIEP TSGNTGVGLA LTCASMGIKL ILTMPETMSQ ERRSLLKAYG AEIVLTPGAD
GMRGAIAKAE ELAATTENSF IPQQFRNPAN PRAHEESTGV EIWEDTGGKV DIFVAGVGTG
GTITGITKFL KAKNASLQAV AVEPAASPVL SGGKPGPHPI QGIGAGFIPE VLNLKVVDEV
FQVPGDKALE TARRLAREEG ILVGISSGAA MYAALEVARR PENNDKLVVV LLPDTGERYL
STELFKEELS KESFQANQ
|
|---|
| |