| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2788 |
|---|
| Symbol | |
|---|
| ID | 4955501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3024053 |
|---|
| End bp | 3024865 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640181968 |
|---|
| Product | copper amine oxidase domain-containing protein |
|---|
| Protein accession | YP_001114117 |
|---|
| Protein GI | 134300621 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.83437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAG CCCCATATAT TGCACAGAAT CGAACTTTTG TACCAGTTCG TTATTTAGCC
AACGCCTTGG GTGTTCCGAA TGAAAAGATA GGCTTTGAAA ATAATATGGT GGCACTAAAT
GCGGAAAAAG TTGTAGCTAA AATGTTCGTA GGGCAGAAGA AGATTATAAC TAACGATACA
AGCAAAGTCA TTGACGTGGC CCCGGAGCTG AAAGCAGGGC GTACTTACTT GCCAGCTCGC
TTTGTCGCTG AAGCCTTGGG CTATCAGGTT GGTTTTGTCA ACGGCATGGT AGTATGCTAC
ACCGGAGATA TGCCGGATGT TTCTGCTATT GCAGAATATA TCGGGAAACC CACAACCCCG
AAAAACCCAG TAGAAACCCC TGATCAAGAA GGAGTGGTGG ACGTTGGTAA GGTTGGTCAA
CCAGCAGCCA ATTTCCCTTG GGCTAAAGAA GAAAAATTAA GGGGAAATGG TGTTAAGGTT
ACATTAGCAA ATTTGAAAAG CAGTAATGTT TATAAACTTG GAGACAGTTA CAAAGTCTTA
GACATGAGCG TAACTCCTGA AAACATTAAA GTTAAGCAGG AAGTTAACAG ACCTATCGGG
TTAGAGGTTC TTTTGGTCGA TGAAGATAAT ACTGTAAGAC GCAGAATGAC CGGCTCTCCT
AAGGAAGGTT GGTGTACTTA TAGTGTTAGT GATGAACTGG AGGTAGAGTT AGGAAACTTA
AAACCTGCAG ATATTAAGAA AGTTAAATAC ATTGTTGTCT ATGGTTGGGA CTTTATTGAA
GTAGAAAACC CCCTGTATGA AGGAGGGAAA TAA
|
|---|
| Protein sequence | MDAAPYIAQN RTFVPVRYLA NALGVPNEKI GFENNMVALN AEKVVAKMFV GQKKIITNDT
SKVIDVAPEL KAGRTYLPAR FVAEALGYQV GFVNGMVVCY TGDMPDVSAI AEYIGKPTTP
KNPVETPDQE GVVDVGKVGQ PAANFPWAKE EKLRGNGVKV TLANLKSSNV YKLGDSYKVL
DMSVTPENIK VKQEVNRPIG LEVLLVDEDN TVRRRMTGSP KEGWCTYSVS DELEVELGNL
KPADIKKVKY IVVYGWDFIE VENPLYEGGK
|
|---|
| |