Gene Dred_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2783 
Symbol 
ID4955484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3019218 
End bp3020321 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content39% 
IMG OID640181963 
Productphage integrase family protein 
Protein accessionYP_001114112 
Protein GI134300616 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00148084 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTCAAA TTAAACTCTT AAAAACTGGT GTCTATAATA TAACAGTTTA TCTTGGCAAA 
GACAACCAGG GGAAAAAAGT TACTAAAAGT AAAGTTTTTC ACGGTAAGAA GAGAGAAGCA 
GAGCAATTCG CCAAGATATT TGAAACTAAA CTGAGAAAAA GTTTGCAACC TGGTTCGCAG 
ATGCTAGTTA GTGATTACCT AGACTATTGG CTCAAAAGAA TTCAGCCTAG CATTGAAGAA 
CGTACTTTTA AAACTTATTC TTGGCATTTA AAACGTTTAA AGGAAACGCT AGGAGATATT 
GAGTTAGGCG AGTTAAAGGT ACTCTTAGTC CAGGAACGTC TAAACGAATT AAAGGACATT 
TCCGAAACCA GTGTGCGCAA AATTACCACC ACATTCAGAA CAGCCCTTCG CCAGGCAGTA 
GTGTGGGAAT TGCTTGAAAA GGACCCTACA GTAGGCTTGA GATTACCCAG GAACCCTAAG 
AAGGAGAAGA AAGTTCTCTC ATCGGATGAG CTAATAAAAT TTTTAAATGC AGCAAAGGAA 
TATAAATATT ATTTAGTATT ACGCATATTA GCTGTCACTG GCATGAGGCT TGGCGAGTGT 
CTAGGGTTAA TGTGGAAGGA TCTCAACTTT GATAAAGGGA CAATGAAAAT CCTACGTTCT 
GCTGATTCCA AAACACGCAA GGTTCTTGAT AAACCAAAGA ATGATAGCAG CCGGCGAACT 
GTTACCATTG ATAAGGAAAC CGTAGAATTA TTAAAGACGC ACAGAAAAAA ACAAGCTAAA 
AGGAAAGTAA CAAGTATTAG GATTGAAGAC GAGCTAGTTT TTCATGTCAA TGGAAGGCCG 
ATAACTCATA AGGCCATTGA TAGAACAATT AAAACAGCTC TAAAAAAAGC AGAGTTACCC 
ATGATAAGGA TTCACGATCT GCGACATACG GCCGGTTCAA TTCTTCTTGA TGCGGGTTAT 
TCATTGCCAA CTGTGTCAAG TTTACTGGGG CACAGTACCC CCGCAACAAC CGCTGCCATT 
TATTCACATG CTATACGCAG AGATATTAAT GTTACCGATG CACTAAGCCA TTCGGAAATT 
CAGTCGGAAA AAAATATTAA ATAA
 
Protein sequence
MAQIKLLKTG VYNITVYLGK DNQGKKVTKS KVFHGKKREA EQFAKIFETK LRKSLQPGSQ 
MLVSDYLDYW LKRIQPSIEE RTFKTYSWHL KRLKETLGDI ELGELKVLLV QERLNELKDI 
SETSVRKITT TFRTALRQAV VWELLEKDPT VGLRLPRNPK KEKKVLSSDE LIKFLNAAKE 
YKYYLVLRIL AVTGMRLGEC LGLMWKDLNF DKGTMKILRS ADSKTRKVLD KPKNDSSRRT 
VTIDKETVEL LKTHRKKQAK RKVTSIRIED ELVFHVNGRP ITHKAIDRTI KTALKKAELP 
MIRIHDLRHT AGSILLDAGY SLPTVSSLLG HSTPATTAAI YSHAIRRDIN VTDALSHSEI 
QSEKNIK