| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2758 |
|---|
| Symbol | |
|---|
| ID | 4955334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2991583 |
|---|
| End bp | 2992305 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640181938 |
|---|
| Product | UbiC transcription regulator-associated domain-containing protein |
|---|
| Protein accession | YP_001114087 |
|---|
| Protein GI | 134300591 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.37249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTAGACA ATCATAACCC ACTACCTTTG CATATACAGT TAAAAGAGAT TTTATTAAAA
GAGATTAGAC AAGAGGTCTA TGAAGAGAAA ATACCCAGTG AAAGGGAACT AATGGATAAG
TATTCTGTTA GCCGTACAAC CGTACGAGAG GCGGTAACCG CCTTGGTGCA TGAAGGGGTA
CTGGAGAAAA TTCATGGCAA GGGAACCTTC ATTAATCGCT CTCATTCAGT CAATGAATGG
TTAGGTTATC TAAGTAGCTT TACTGAAACC ATTGAAAGAA TGGGAATGGA ATCCGGAGCA
CATTTGCTGT ATCAGGGAAC CGGTTCTCGC ATGGAGATAG CAGAAACCCT TGGTGTAGAA
GAATATTATT GCATAAAACG GCTGCGGTTT GCTGACAATG AGCCCATCGC CATAGAGAGA
CATTACTATC CCTTAGAAAT TGGCTTTATT CTCAAAAAAT ATGACTTAAA TCAAATTACG
TTGTATGAGA AACTAGAATT AGAGGGAATT GTTTTGCAGG ATGCGGAACA GAGAATATCT
GCAGAGAATC CCAGTGCCAA TGATGCGAAA TTATTAAGAA TCTCAGAAAA TACCTGTACA
TTAGTTGCTC AACGGTTAAT TACCGATCCC CTAGGGAAAC CCATAGAATA TTACCACAGT
ATTTATCAAG CAGATAAGTA TGTGTTTAGT TTGAAAATGT CCAGAGGTGT GCGAGTAGTT
TAA
|
|---|
| Protein sequence | MLDNHNPLPL HIQLKEILLK EIRQEVYEEK IPSERELMDK YSVSRTTVRE AVTALVHEGV
LEKIHGKGTF INRSHSVNEW LGYLSSFTET IERMGMESGA HLLYQGTGSR MEIAETLGVE
EYYCIKRLRF ADNEPIAIER HYYPLEIGFI LKKYDLNQIT LYEKLELEGI VLQDAEQRIS
AENPSANDAK LLRISENTCT LVAQRLITDP LGKPIEYYHS IYQADKYVFS LKMSRGVRVV
|
|---|
| |