| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2754 |
|---|
| Symbol | |
|---|
| ID | 4957941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 2985538 |
|---|
| End bp | 2986779 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640181934 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001114083 |
|---|
| Protein GI | 134300587 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGA ATACCAATAA ATCCACATAT AATCAACTAT TTCAAACAAT TTATAACGAA
AAATTTTTAA GCAATGTCAA AGAATCAGAA GTCGATGCTT ACGCTAAAAA ATTAACCGTT
ATCAAACTAA TTCAAATGAT TTCCTATGCA CAGTTAGAGC AACTTAAAGG TCTCCGCCAT
ATTAGTAACA GCTTAAATGA TGATAATTTC AGCTCGGCAG TAGGTTTAGA TTCAATTAGT
GCTTCACAGT TATCCCGTAA ATTGAGAGAT TTATCTCCTG AATTAACTCA GTCTCTGTTT
TCTGATATAG TCCATCAGTT TGGTACTGAA ATAGGTTTTA AATCAATAAG ACAAGAATTA
GGTCGCATTT ATCTGATAGA CTCTTCAACA ATAAGCCTTT GTCTATCCCG ATACCGCTGG
GCAGAGTTCA GAAAAACCAA AAGTGGAGTT AAATTACACC TCCGTATCCA GCTGCTTGAG
CAAGGGGTTC TACCAGACAA AGCCATAATT AAACCAGCTA AGTCTGCTGA CAAAACACAA
ATGGATGCCT TGGTTGTAGA AAAAGATGCC CTAAACGTCT TTGATCGTGG CTACTTGGAT
TACAAGAGGT TTGACAATTA TTCTAATAAT GGTACCAGAT TCGTTAGCCG TTTAAAGAGT
AACGCAATAG TTGAAACACT AGAAAAATTT CCAACAAACC AAGATAGCTT AATCAAGAAA
GACCATAAAG TAATCCTAGG CAAAGACGGT ACAACCAAAA TGCAGAACCC CTTGAGACTA
ATAGAAACAG AAGATACCGA GGGTAAGCCT GTAATTATCA TTACCAACGA CTTTGAGTTA
AGTGCCGAGG AAATAAGCGA CATATACCGC TACCGCTGGC AGATAGAATT ATTCTTTAAG
TGGATCAAAC AACATTTCTG TGTAAAACAT TTCTATGGTT TAAGCCAGCA GGCTGTGGAA
AACCAATTGA TGATAGCACT GATTACCTAC TGTTTAATGA TGTTGCTTAA AAAGAAAACA
GGTTACGAAG GCCCATTACT AAAAATTCAA ATGTTGCTTC ATACATGCCT TTATGTAGAC
TTCACCAAGT TTGTACGAAA GCTCCACCAC AAGTCAGGCC AAAGTTCAAG AGGACGACGG
TGTATAGACC ATGAAAAAGT CTACAACATT ACGTTAGTAC AGGTACTACA AGGTGAGGCA
GAACACCTGG ATGATCTAAC TTACGACCCG ATAATAGCTT AG
|
|---|
| Protein sequence | MDKNTNKSTY NQLFQTIYNE KFLSNVKESE VDAYAKKLTV IKLIQMISYA QLEQLKGLRH
ISNSLNDDNF SSAVGLDSIS ASQLSRKLRD LSPELTQSLF SDIVHQFGTE IGFKSIRQEL
GRIYLIDSST ISLCLSRYRW AEFRKTKSGV KLHLRIQLLE QGVLPDKAII KPAKSADKTQ
MDALVVEKDA LNVFDRGYLD YKRFDNYSNN GTRFVSRLKS NAIVETLEKF PTNQDSLIKK
DHKVILGKDG TTKMQNPLRL IETEDTEGKP VIIITNDFEL SAEEISDIYR YRWQIELFFK
WIKQHFCVKH FYGLSQQAVE NQLMIALITY CLMMLLKKKT GYEGPLLKIQ MLLHTCLYVD
FTKFVRKLHH KSGQSSRGRR CIDHEKVYNI TLVQVLQGEA EHLDDLTYDP IIA
|
|---|
| |