Gene Dred_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2717 
Symbol 
ID4957004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2943837 
End bp2945018 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content46% 
IMG OID640181897 
ProductYibE/F family protein 
Protein accessionYP_001114046 
Protein GI134300550 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00980244 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAA AGGTTACTGG CTGGTTGATT GTTATAATAG CAATAACCGT TCTATTAGGT 
GGACAAGCCT GTTGGGCCAA CGAAACAGAT ACCGTGGGAA GCATCAGTCA TGAACCCGAG
ATTATTGTTC GTGCCAAGGT TTTAGAGGTG TCCAAAGGGG AACAGTCAGA CCCCTCTCTG
CAGGGATGGA TTCAGGGAGA AGAACAATTG GTAACCGCCA GGGTACTAAA CGGTGATTAC
AAGGGGAAGC AGGTTGATTT CTTCCATGTG ATTCCCGATA ATCCGGGTAT GGCAGTGGTT
GTAAAACCTG GCGATGAGGT AGTGTTATCC CTGGAAGTTG AAGCGGGTAA AATCACCAAT
GCTTTTATCT CAGACCATGC CCGTGATAAG AAACTGTATA TCTTGGCCGT TTTTTTTGTT
CTGTTAATGG TCGCCATCGG GGGACTAAAG GGAGCTAAAT CTGTGCTAGC CCTAACTATA
ACCGGGGTCG GTATTTTTTA CATATTACTG CCAATGATGT TCAAAGGACA TAGCCCCATC
CTATTAACGG TTCTAGTGGC AGCCGTTATG ACAACCATAA CCATGGTGCT GGTCCATGGT
TTTAACTTAA AAACTCTGGC GGGTATAATT GGTACCACCA GTGGGGTTAT TACGGCGGGG
ATACTGGCTA TGCTGGTGGG CAAAGCAGCA AAACTTACTG GTTTCAGCAG TGAAGAGATG
CAAATGCTGC TGTATATTCC CCAGCAAATA AAGTTTGACT ATCAGGGTCT GCTCTTTGCT
GGCATGATAA TTGGGGCCCT GGGAGCGGTG ATGGATGTGG GGATTTCCAT TGCCTCTGCA
GTGGAGGAAG TAAAAAGGGT AAATCCAGCC TTGGATTGTC GTCAGTTAAT ACGGGCCGGC
ATGAATGTGG GCAGAGATGT TATGGGCACA ATGGCCAACA CTTTAATTCT AGCCTATACC
GGCGGTGCTT TGCCGCTGAT ATTAATCTTC ATGGCCTATG ATATGCCCTT TTTAAAGATC
ATCAACCTGG ACCTTATTGC CACGGAAGTT GTCCGGGCTT TAACCGGCAG CATCGGTCTG
GTTTTAGCCA TTCCTGTGAC ATCTGTGGCA GCAGGTTTGT TGTTTACTAA AGTAAAGAAG
AAACAGGCTC AGACAGAGGA AAAAGCGGGA TTGGAAGGAT AA
 
Protein sequence
MQRKVTGWLI VIIAITVLLG GQACWANETD TVGSISHEPE IIVRAKVLEV SKGEQSDPSL 
QGWIQGEEQL VTARVLNGDY KGKQVDFFHV IPDNPGMAVV VKPGDEVVLS LEVEAGKITN
AFISDHARDK KLYILAVFFV LLMVAIGGLK GAKSVLALTI TGVGIFYILL PMMFKGHSPI
LLTVLVAAVM TTITMVLVHG FNLKTLAGII GTTSGVITAG ILAMLVGKAA KLTGFSSEEM
QMLLYIPQQI KFDYQGLLFA GMIIGALGAV MDVGISIASA VEEVKRVNPA LDCRQLIRAG
MNVGRDVMGT MANTLILAYT GGALPLILIF MAYDMPFLKI INLDLIATEV VRALTGSIGL
VLAIPVTSVA AGLLFTKVKK KQAQTEEKAG LEG