| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2700 |
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| Symbol | |
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| ID | 4956396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2927802 |
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| End bp | 2929055 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640181880 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001114029 |
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| Protein GI | 134300533 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAATA TACGAATTAC CTCACCTCTA AAAATCTTTT TGGTATCCTT TTTAGCCATG
ACCATTGCTA TGGCTACACT GGCCTATGCC ACCTACCAGG CCTGCTACGA CATTTTGGCC
AAGGACCTGG GCCTACGGGC CCAATTTTCG GCTCAAGTTG CGGCAAGTCT TATTGAAGTG
GATCAGGAAC TCGTAAATCA AATGAAGCAA TTGGATATCC TAAGCTCCCG GAATCACGTT
GCAGCAATGG AATTCAAGCG AAAAATGGCA CCCCTGTTAA AGCACAGTGA CATTAAATAT
ATTTATGTCG AGACTAAGTT GTCAGGCAGT GAAATACGGT ATTTTGTAAG CCCTGAGGAG
GAAAAACTAT ATGCACAGCC ACCGGGAACA CCCATGGAGT ATTTTTATGT CCTGACCAGT
GAAGATGAAA GTGGCTATCG AAATCGAGAT CGCTATGATG TTGCCAATCC TTTAAGAGAA
AGGGCCTATG TAGAAAGGGT ACCTACCTAT GGCCTGGACA CTAACAACAG ATGGGGTAGT
GTGATAACTG GTTATCAGCC TCTTTTTGAC CATAATAATC AATTTATTGG TTTACTGGGT
GTTGATATTG CATTGCATCA ATTTGACCGT TCAGTCTGGT ATGTAAAAAA CATTGTAATT
ATGAGCTTTG GCATTATCGT GTTGTTAGGG GGTATCATTC TCTTTTTTGC CTCAAAGATA
CTAAGCAAGC CCCTATACAT GGATGAATTG ACAAAATTGT TTAACCGGGA ATACATGAAA
ATTCGTTTAG AGAGCGAAAT AAGACGGGCC AGGCGGAATA AGCTTCCTCT TAGCTTTCTC
ATGCTGGATC TGGACTATTT TAAAAGTATT AATGACTGTT TTGGCCATCA AACAGGTGAT
TTAATATTGA AAAAAATCTC TGAATTAATC TGTGTATCCC TAAGGGAAGA AGACCTTGCC
TTCCGATATG GTGGTGAAGA AATAGCCATT TTGTTACCGG AAACCGGACT TTATGAAGCA
AAGATTGTGG CAGAAAGGTT ACGTCAGGTC ATTGAAACAA ACAGTTTGTA TGTTAATCAT
TATGAGGAGC CTATTCATGT AACCATCAGT ATTGGCCTTG CTGAACTGGC AGCAAAGGAT
ACACAGGAAA CTTTGATTAA AAAAGCAGAT GATGCGTTGT ACCTGGCGAA GAAGAAGGGT
CGCAACTGCT ATCAATGCAT TGAGGAATCT GGAAAAAACC TTTCTCCGGA ATAA
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| Protein sequence | MVNIRITSPL KIFLVSFLAM TIAMATLAYA TYQACYDILA KDLGLRAQFS AQVAASLIEV
DQELVNQMKQ LDILSSRNHV AAMEFKRKMA PLLKHSDIKY IYVETKLSGS EIRYFVSPEE
EKLYAQPPGT PMEYFYVLTS EDESGYRNRD RYDVANPLRE RAYVERVPTY GLDTNNRWGS
VITGYQPLFD HNNQFIGLLG VDIALHQFDR SVWYVKNIVI MSFGIIVLLG GIILFFASKI
LSKPLYMDEL TKLFNREYMK IRLESEIRRA RRNKLPLSFL MLDLDYFKSI NDCFGHQTGD
LILKKISELI CVSLREEDLA FRYGGEEIAI LLPETGLYEA KIVAERLRQV IETNSLYVNH
YEEPIHVTIS IGLAELAAKD TQETLIKKAD DALYLAKKKG RNCYQCIEES GKNLSPE
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