Gene Dred_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2686 
Symbol 
ID4956126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2910527 
End bp2911273 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content47% 
IMG OID640181868 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001114017 
Protein GI134300521 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0241987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACTTA CCGTCCTTGG CTGCTGGGCG CCTTACCCCC GGGTCAGCGG TGCCTGCTCC 
GGCTATTTAT TGCAGGATAA CGGGTGTAAT CTGCTTATTG ATGCGGGTAA TGGCATATTA
AGTAAAATGC TACAGCACAT TAACATTGAG GACCTGGATG CGGTATTTCT TAGCCACCTG
CATCCAGATC ATATCATGGA TATTTACTCC CTGAGACATG CCATCGAGGC CGCTAATCGA
GAGGGGCGGA TGAATAGGTT GGTGCCCCTT TACATGCCAA CGGGCCCCGC GGAGGATTTT
CAAAGGATTA AAGACTTTAC GAAAGCCTTT CAAATTCATA TAATTGATGA AATACCTGAT
CCTCGGGAAA TAACAATGGC AGGGCTAAAA GCCAGGTTTG TTCCGGCAAA ACATAATTTG
CCGGCTTACA GCATTTCCAT TGAGGGAAGC AAAAGGTTTA TATTCTCCGG GGACACCGCT
TTCAATGAAG GCTTAATTGA ACTGGCCATC GGGGCAGACC TATTACTTTG TGAGGCCAGT
GGTTTAGAGC AGGATGCCGA TTATCTAAAA GAAAAGCACC TAACTGCCCG TCAAGCAGGG
CAAGTGGCTG CGGCAGCCGG TGCAAAACGT TTAATGATCA CTCACTTTTA CCCCGAATAT
GTTCTCTCAA AATTGCAAAG ACAGGCGGAG GAGGGATTTG GTAAGACCAC AGAACTAGCC
AGGGAAGGAG CTACCATCGT GATATAA
 
Protein sequence
MKLTVLGCWA PYPRVSGACS GYLLQDNGCN LLIDAGNGIL SKMLQHINIE DLDAVFLSHL 
HPDHIMDIYS LRHAIEAANR EGRMNRLVPL YMPTGPAEDF QRIKDFTKAF QIHIIDEIPD
PREITMAGLK ARFVPAKHNL PAYSISIEGS KRFIFSGDTA FNEGLIELAI GADLLLCEAS
GLEQDADYLK EKHLTARQAG QVAAAAGAKR LMITHFYPEY VLSKLQRQAE EGFGKTTELA
REGATIVI