| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2666 |
|---|
| Symbol | |
|---|
| ID | 4958637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 2886518 |
|---|
| End bp | 2887639 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640181847 |
|---|
| Product | spore germination B3 GerAC family protein |
|---|
| Protein accession | YP_001113997 |
|---|
| Protein GI | 134300501 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02887] germination protein, Ger(x)C family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAAA AGATCAAACC TAAAGCTGTT TTACTGCTTT TGTTATTGAT AACTGTACTT
ACAACTGGCT GCTGGGATGC TGCTGATGTA AAGGATATAG TGATCCCCTT TATAGCCGGA
TTTGATTATG AAAAAATAAA GGGCCAGGGT AAATTTTATC TATATATAAA CAACCCTGTT
GTAGGAGAGG CCAGGGAAAA GTCCGATGTA CTGGTGGCAG AAGGGGAAAC AGTGGGGGAC
ACCCGGGTTG ACCGGGGTAA CAAGTCTGCC CGCAGTATAT CTGTGGGGGA TTTGAAGGGT
TTTTTATTTG GTAAAGAACT TGCCAGCCGG GGCTTGGAGG AAACATTTGA TATATTATAT
CGCAACCCAA GGATCAGTAA GACCCCTAAT TTAGCTGTTG TGGATGGTAT GGCTAAGGAT
ATATTTTATC TTAAGCCAAA GAATTTTCAG ACTGTAGGCG AAAATGTACT TGATATGTTT
AAAAATTCAT CTAAAAATAA CTTTATCCCG GACGAGACCA TACATAATTT TAGAATTAAT
GCCCTTACTC CTGGTTTTAA TCCGGTGTTA CCGGTACTTA GTATTCATGG GCAGGACAAG
ATAAAAATAT CCGGAGCAGC TTTATTTAAA AAGTATAAGA TGGTGGCTAT GATTAATGCC
GAGGATATGC GAGTATTAAC CTGGCTAAGG GGCGAGGAAA AAAAAGGGGA TATATTGTTT
GAACTTACAG ATAAGCAGGG GGGAGTAAAA AAAATAGCCT TTGAAGGGGG AAATAAACGC
TCTGTTAAAG CAAAGCTGGA AAATGGACAA CCTGTCTTTG AAGTAGAAAT TAAGCTAAAA
GGAATGGTGG CGGAAGCTTT AGGAGATTTT CGGTTTGCCG GTGAAGAAAA AAATGTAGAA
CTAGCTGAAA AAGCCCTGGA AGAACAGGTT AAAAGGCAGT GCGAAAGTTT CATTGAAGAT
TTACAGTATA AATACAGAGT AGATGCAATT TTGTTGGGTA AATATGCCAG AATATACTGG
CCAGAATTGG TGGAGAAACA GGATTGGGAC GAGGTATTTT GTAACAGTGA AATTAGGGTA
AAGGTTAAGG TGGTTATTCA AGGCAGCGGC GAAGTGGCCT AA
|
|---|
| Protein sequence | MVKKIKPKAV LLLLLLITVL TTGCWDAADV KDIVIPFIAG FDYEKIKGQG KFYLYINNPV
VGEAREKSDV LVAEGETVGD TRVDRGNKSA RSISVGDLKG FLFGKELASR GLEETFDILY
RNPRISKTPN LAVVDGMAKD IFYLKPKNFQ TVGENVLDMF KNSSKNNFIP DETIHNFRIN
ALTPGFNPVL PVLSIHGQDK IKISGAALFK KYKMVAMINA EDMRVLTWLR GEEKKGDILF
ELTDKQGGVK KIAFEGGNKR SVKAKLENGQ PVFEVEIKLK GMVAEALGDF RFAGEEKNVE
LAEKALEEQV KRQCESFIED LQYKYRVDAI LLGKYARIYW PELVEKQDWD EVFCNSEIRV
KVKVVIQGSG EVA
|
|---|
| |