| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2665 |
|---|
| Symbol | |
|---|
| ID | 4958642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 2885407 |
|---|
| End bp | 2886540 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640181846 |
|---|
| Product | spore germination protein |
|---|
| Protein accession | YP_001113996 |
|---|
| Protein GI | 134300500 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATAC CACATACAGA GGATGTTTAC GAGGTTAAGA TGAGAAAAAA TGCCAATGTT
ATCACCAGTA AACAGCTGAT TTTTATTATT GTCAGTTCCA CCGTAGGGGT AGGTATTTTA
ACCCTGGCTG ACTCGGCGGG CGAAGTGGCT CAACAGGATG CCTGGATATC GGTGGCCATG
GGAGCCTTGC TACCACTGGT GGGGCTAGTT GCCATTGTTT TAAATTGCAG CAAGTTTCCT
GGGTTAACCC TGGCGGAATA TAGCGAAAGG ATATTGGGTA AATGGTTGGG TAAACTAATT
TCGCTGGTCT TTGTATTTTA TACCATTGTT ACTGCTGCTA TTATTACTAG TACATTTGTC
CATATGTTAA AGATATATTT GTTTCCTGCA ACACCCCGGT GGGCTTTAGT AGTGCTGATT
CTTTCGGTTA TTACTTATTG GGGGTCCAAG GATGCTAGGG TTTTAGGCCG GGTCAATGAA
CTGATGTTTT ATGAAGCAAT TATTGTATTC CTGTCTTTAG TACTGGCTTT TCCCAATATT
GATCTTACCT TTTACCAACC TATAGGCCAT GCCGGGATCA GTAATATTTT AATAGCAGCC
TCAAAGACAA TATTTGCCTA TACTGGTATG GAGTTGTTAT TGGTGTTTTA CCACATGGTA
CAAAATAAAA AAGAAACTGT TAAAGCAGGG TTAACTGCCA TTACTATAGT TTTGTTCATC
TATTTAGGGA TAACTATTAC TGCCTTGGGG GTCTTTGGAC CCTTTGTCAT AGGTAAGGTT
CGCTTTAGTT TGATGGTTTT ATTAAAAACC TATACTGCAC CGTTGATTGA GAGGACAGAG
TTCTTTTTCG TTATTTTTTA TGTTTTTGTA GCCTTTCGAC CTATAGGTAA CTATTATTTT
GCCAGTCGCT ATACAGCGGA AAAAATGCTG GGCCTTAATG CCCCTGGTCT TATAACAATA
GTTATTTTCC CTATTGCTTT AGCAGTAGCT TCGTATCCGG ATAGTTTTGA ACAGACAGTG
GCCATTAGCT CGCAAATAGG TATAGTGGGA CTGGTTTTCT TAATAATTGT TCCTTTGTTA
TTATGGTTTA TCTCTTTAAT AAGGGGAATA GATGGTGAAA AAGATCAAAC CTAA
|
|---|
| Protein sequence | MKIPHTEDVY EVKMRKNANV ITSKQLIFII VSSTVGVGIL TLADSAGEVA QQDAWISVAM
GALLPLVGLV AIVLNCSKFP GLTLAEYSER ILGKWLGKLI SLVFVFYTIV TAAIITSTFV
HMLKIYLFPA TPRWALVVLI LSVITYWGSK DARVLGRVNE LMFYEAIIVF LSLVLAFPNI
DLTFYQPIGH AGISNILIAA SKTIFAYTGM ELLLVFYHMV QNKKETVKAG LTAITIVLFI
YLGITITALG VFGPFVIGKV RFSLMVLLKT YTAPLIERTE FFFVIFYVFV AFRPIGNYYF
ASRYTAEKML GLNAPGLITI VIFPIALAVA SYPDSFEQTV AISSQIGIVG LVFLIIVPLL
LWFISLIRGI DGEKDQT
|
|---|
| |