Gene Dred_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2654 
Symbol 
ID4958188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2874833 
End bp2875663 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content44% 
IMG OID640181835 
ProductNLPA lipoprotein 
Protein accessionYP_001113985 
Protein GI134300489 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AGTTTGCATT TTTGGTTGCC TGCTTACTGA CCTTGAGCTT GGTTCTGGCC 
GGTTGTGGTG GCGAAACAAA GGAAAAAACC GAAGCCCCCG GCAAAGACGC TAAAATATTA
AAGGTGGGTG CTACCCCAGT TCCCCATGCA GAAATTTTAA AAGTTGTTAA GCCCATTCTA
GAAAAGGACG GTATTCAATT AGAGATTGTT GAGTTTAATG ATTATGTACA GCCCAATCTG
GCTCTCAATG ACAAGCAACT GGATGCCAAC TACTTCCAAC ACCTTCCCTA CCTCGAAGAT
TTTAATAAAC AGAAGGGCCT GGAACTTTCC TATACAGCTA AAATTCACTT TGAGCCAATG
GGTCTTTTCT CCAGAAATGT TAAAGCTGTT AGTGATTTCA AAGAAGGCGA CAAAATCGGT
ATTCCCAATG ACCCAACCAA CGGCGGCAGG GCACTGGCTG TTTTAGAAAA GGCCGGTCTA
CTGAAGCTTA AAGAAGGTGT TGGCATCAAT GCCACCGTAC GGGATATTGT AGAGAAAAAA
GTTGAAGTAA TTGAACTGGA AGCTGCTCAA TTGCCCCGTT CCGTAGATGA TCTGGCCGGC
GCTGTGATTA ACGGTAACTT TGCTGTACAG GCTAAATTTG TTCCCACCGA TGCTCTGGTG
GCTGAAGATG CTAAGTCCGA GGCTGCGGAC ACCTTCGGTA ATATTTTAGC CATCCGCAAG
GGTGATGAAA ATCGTGAAGA GATTAAAAAA CTTACTGAAG CCCTGAAGAG TGCTGAAGTT
AAGAAATTCA TTGAAGATAC CTACAAAGGT GCTGTTGTTG CTACCTTCTA A
 
Protein sequence
MKKKFAFLVA CLLTLSLVLA GCGGETKEKT EAPGKDAKIL KVGATPVPHA EILKVVKPIL 
EKDGIQLEIV EFNDYVQPNL ALNDKQLDAN YFQHLPYLED FNKQKGLELS YTAKIHFEPM
GLFSRNVKAV SDFKEGDKIG IPNDPTNGGR ALAVLEKAGL LKLKEGVGIN ATVRDIVEKK
VEVIELEAAQ LPRSVDDLAG AVINGNFAVQ AKFVPTDALV AEDAKSEAAD TFGNILAIRK
GDENREEIKK LTEALKSAEV KKFIEDTYKG AVVATF