Gene Dred_2640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2640 
Symbol 
ID4957192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2859903 
End bp2861306 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content43% 
IMG OID640181822 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001113972 
Protein GI134300476 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGCA TTAAAAGAAG GATGGTCTGG CACTATGTTA TCGTTATCTT TCTAACTGTG 
CTTGTGCTTG AAGGTTTGTT TATAGGTACC ATAAGACAAT ATTACTTTGG CAGTGCCGAG
CAGGCACTGG TGAGCCGTGC CACTGTTTCT GCGAACTTTT ATAATAAATA CCTACGAGAT
TATAATTTTT ATTTAAAAAC AAATGCCCAA AAAATATTGG AAACTTTACC CAAGGATGAA
CCAGCTAGAA TTGAGATCAT AGACTGGCAG GGGAACGTGC TGGTAGATTC TAATGGTTTT
CCACGGGCTC AAAGGGTGGA TTCACCGGAC TTTAAGGAAG CCCTGGCAGG GAAAACCGGG
GTCTGGAGGG GGAAAAACGA CATCACCGGG GAAAGAATTC TTGCTGTTTC CAACCCATTA
AAAGATGGGA ACCGATCTGT GGGGGTTCTG CGGTATGTTG TTTCCCTGGA AGCTTTACAT
AACGTGGTGT TGAAGATAAC CCTTGTTTCT GTGACCGTGG GTTTATTAGT TGTGCTCCTG
GCTGTGGGAG TAAGCTTAGT CCTAGCCAGA AGCATTGTCA TTCCTCTGCA AGAAGTGACC
CGGGTTGCCG GGCAAATGGC CAAGGGAGAC TTTTCGGTGA AAGCGACAAA AAGGGAGGAT
GACGAAGTAG GAAAACTGGC CGATACTCTC AATTATATGT CTGAAGAAAT TCTTAAGAGC
GATAAAATGA AAAATGATTT TATATCGTCC ATATCCCATG AGTTAAGAAC ACCCCTTACC
TCCATCAAGG GCTGGGGCGA AACCCTTTTC GGTGAGGAAC TGCAGGACAG GGAGGAAGTG
AAGGAAGGAC TGAACATCAT CTGTAAGGAA ACAGACCGGA TGATCGGCTT GGTAGAAGAG
CTTTTGGATT TTTCAAGGTT TCAGTCTGGT CGTATTAAAT TAAACCTGGA AAAGATAAAT
ATTAACTCCC TTTTAACCGA AGTGATTCAG CAATACGCCA TACGGGTTCG TCAGAAAAAA
ATTGAGATGC CGTACCAATT TAATGACAGT GTGCCAGAGA TAACTGGAGA CAGAAACCGT
TTGAAACAAG TCTTTATTAA CTTATTGGAT AATGCCGTTA AGTTTACTCC ATTTTGTGGT
AAGGTACAGA TTAGCACAGA ATATTCAGAG GGAACAATTA AAATAGACTT TGTCAATAGC
GGAGAAGGGA TCCGGTCGGA AGACCTTCCC CGTGTAACGG AAAAATTTTA CAAGGCCAAT
GCCAACCGCC CCGGAAGTGG TCTGGGATTG GCAATTGTTA AGGAGATTAT TAATCTTCAT
CAGGGTGACT TGCATATTGA AAGCATCCCG GGGCAGAATA CCAGGGTGAC CGTAATTCTC
CTAGGAGAGC AGAAAAAACT CTAG
 
Protein sequence
MKGIKRRMVW HYVIVIFLTV LVLEGLFIGT IRQYYFGSAE QALVSRATVS ANFYNKYLRD 
YNFYLKTNAQ KILETLPKDE PARIEIIDWQ GNVLVDSNGF PRAQRVDSPD FKEALAGKTG
VWRGKNDITG ERILAVSNPL KDGNRSVGVL RYVVSLEALH NVVLKITLVS VTVGLLVVLL
AVGVSLVLAR SIVIPLQEVT RVAGQMAKGD FSVKATKRED DEVGKLADTL NYMSEEILKS
DKMKNDFISS ISHELRTPLT SIKGWGETLF GEELQDREEV KEGLNIICKE TDRMIGLVEE
LLDFSRFQSG RIKLNLEKIN INSLLTEVIQ QYAIRVRQKK IEMPYQFNDS VPEITGDRNR
LKQVFINLLD NAVKFTPFCG KVQISTEYSE GTIKIDFVNS GEGIRSEDLP RVTEKFYKAN
ANRPGSGLGL AIVKEIINLH QGDLHIESIP GQNTRVTVIL LGEQKKL