| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2624 |
|---|
| Symbol | |
|---|
| ID | 4956188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 2847266 |
|---|
| End bp | 2847883 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640181809 |
|---|
| Product | putative prophage repressor |
|---|
| Protein accession | YP_001113959 |
|---|
| Protein GI | 134300463 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000879021 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAA CCACGTTTGA TATTTTAAAA TTCTCAGAAA GGTTAAAAGA ATTGATGGAA
AATTCTAATT ACAATACGTA TTCATTAGCT GAAGCAGTTT TTCTCACACC TGGGACAATT
TCAAAATATG TAAACGCGAA AATGGAACCA AAGCGAAACA CCATTGAATT GTTGGCTAAA
CATTTTCAGG TTAATCCAGC ATGGCTGATG GGATATGACG TAGACAAATG GCTTGATGGA
CAAGCCCCGA AAGCAAAAAC AATCCCTTTT ATTAAATCGG CCAATTATGC CGACAACGAA
ATTGACGGAT ACGAAGTTGT ATCCAGCAGT GAAGAAATTG ATCTTTCTTT TTTGGTTCAG
GATAACAGTA TGATTAACGC TAGAATTTTT GAAGGCGACA TTGCGTATAT AAGTAAACAA
TCAACGGTAG AAAACGGGGA AATAGCCGCA GTAGTTATAG ACGGGGCTAT CACATTAAAA
AGGCTTTACA TGATGGACAA CTCTATTGTT TTACACTCCG AAAATCCTAC CATTCCGGAT
AAAGTGTTAT CAAAGAAAGA TAAAAAAGAT ATTACTATTC TGGGGAAAGT AACTTCCGTT
AAATTTAAAG TGAGGTGA
|
|---|
| Protein sequence | MVETTFDILK FSERLKELME NSNYNTYSLA EAVFLTPGTI SKYVNAKMEP KRNTIELLAK
HFQVNPAWLM GYDVDKWLDG QAPKAKTIPF IKSANYADNE IDGYEVVSSS EEIDLSFLVQ
DNSMINARIF EGDIAYISKQ STVENGEIAA VVIDGAITLK RLYMMDNSIV LHSENPTIPD
KVLSKKDKKD ITILGKVTSV KFKVR
|
|---|
| |