Gene Dred_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2607 
Symbol 
ID4957379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2831473 
End bp2833149 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content43% 
IMG OID640181792 
Productphage terminase 
Protein accessionYP_001113942 
Protein GI134300446 
COG category[R] General function prediction only 
COG ID[COG4626] Phage terminase-like protein, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACGA TGAGGAAATG TAACTATCAT CCTTACATCG ATGCATACAT GGATACGATC 
CGGTCTGGTG GTGTCCCGGC TAGTAAAGAC TTACTGCAGG CTATGGACTA TGTTGAATTT
AAGCTTAGCG ATCCTGACGT GTTTATCGAT ACCGAAAAGA TTGACAAAGC TATCGAGCTT
ATGGAGCGGT ATTTTGAAGT TAAACTGCTT GACTGGGAAT TATTCGTTAC AGCTCTAATT
CACTGCTACT ACAAGTCAAA TGATACGGTA GTATTCAGCA CCATCTTTAT TATGATGGGG
CGTGGCAATG GCAAGAATGG GTTTATCTCA CCAGTCGCAT GGTATCTAAC AACCCACTAT
CATGGGGTAA AAGGTTACAA TATAGACATC GTTGCTAACG CTGAGGACCA GGCCAAAACA
TCATTCAATG ATGTATATGA AGTACTCGAA AGAACCTGGA AAAAATCGAA GAAGTTTTTT
TACAAGTCTA AGGAAGTTAT CGTAAATACC AAGACAAATT CCTACATTAA GTTCAATACA
TCTAATGCCA AAACAAAAGA CAGTAAGCGT ACCGGCTGCC TGATCTTTGA CGAGGTTCAC
GGGTACGAAA CATACGATAA CATCAAGGTA TTTACCTCCG GCTTTGGAAA GCGCAAGCAT
TCCAGAGCTT TTTATATTAC TACGAATGGT AATGTTCGTG AGGGCGTTCT TGATGACATG
CTAGCTATTG CTGCTGATAT ACTCAACGGG ACAATTAAGG ACTTGGGGTG GCTACCTTTA
ATCTACAGAA TTGACAGTGA GGAAGAGGCA CTTGACCCGA ATATGTGGCA TAAGGCGAAT
CCTTCTCTGA GGTTTTTCCC GGAACTTCAA AAGGAAATGC AAAATGAATT TATCGAGATG
AAGTACAAGC CTGCCATAGA GGAGGAATTC TACACCAAGC GGCTTAACTG GCCGAGGCAA
AACCGGGAAA TTATTGTCAC CGAATGGGAT AATATCAAGG CAACAAATAA ACCACTTCCG
GATTTATCCT ACAGGACATG CGTCGCTGGA ATAGACTACT CCAAAATAAC TGACTTCGCA
AGTGTGAACC TTCATTTCCG TGAGGGAGAT ATTCGGTATG ACATCAACCA TTCGTGGCTT
TGCTTAAATT CAGCCGACCT TCCAAGGCTG AAAATACCCT GGCGAGAATG GGCCCAGCAG
GGGTATCTTA CCCTGGTCGA TGATGTGGAA ATATCCCCAG ACCTGATCGT TAACTGGCTT
GCCGAGAAGG CTACGAAATA TAACATAATC AAGTTGGCGT TAGATAACTT TCGCTATGCC
CTGCTAGCTA CTAGCCTAAA GCGAATTGGC TTTGATGCTA AAGATAATAA AAATGTTAAA
CTTGTTCGTC CATCCGATAT CATGGCGATT GTGCCGGTGA TTGATAGCTG CTTTGCGAAC
CAAAATTTTG TGTGGGGAGA TAACCCACCA CTGCGATGGG CCACGAATAA TACAAAGAAA
ATTGCCTCTG GGAAAAAGCA GGGGACTGAC ACTGGGAACT TTTACTATGG CAAGATTGAG
GCTAAGAGCC GAAAGACAGA CCCATTCATG GCTTTGGTAG CTGCCATGAC TATTGAAAGT
GAACTGGGTG ACGGTTATTG CGGTGAGACA CCTGATGTTG GTGTGTATGT TTACTAG
 
Protein sequence
MMTMRKCNYH PYIDAYMDTI RSGGVPASKD LLQAMDYVEF KLSDPDVFID TEKIDKAIEL 
MERYFEVKLL DWELFVTALI HCYYKSNDTV VFSTIFIMMG RGNGKNGFIS PVAWYLTTHY
HGVKGYNIDI VANAEDQAKT SFNDVYEVLE RTWKKSKKFF YKSKEVIVNT KTNSYIKFNT
SNAKTKDSKR TGCLIFDEVH GYETYDNIKV FTSGFGKRKH SRAFYITTNG NVREGVLDDM
LAIAADILNG TIKDLGWLPL IYRIDSEEEA LDPNMWHKAN PSLRFFPELQ KEMQNEFIEM
KYKPAIEEEF YTKRLNWPRQ NREIIVTEWD NIKATNKPLP DLSYRTCVAG IDYSKITDFA
SVNLHFREGD IRYDINHSWL CLNSADLPRL KIPWREWAQQ GYLTLVDDVE ISPDLIVNWL
AEKATKYNII KLALDNFRYA LLATSLKRIG FDAKDNKNVK LVRPSDIMAI VPVIDSCFAN
QNFVWGDNPP LRWATNNTKK IASGKKQGTD TGNFYYGKIE AKSRKTDPFM ALVAAMTIES
ELGDGYCGET PDVGVYVY