Gene Dred_2605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2605 
Symbol 
ID4958572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2829518 
End bp2830294 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content44% 
IMG OID640181790 
Productpeptidase S14, ClpP 
Protein accessionYP_001113940 
Protein GI134300444 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGGA CTTGGGAACT AAAGCAAGCA GCTACTCCTG ATACCTTAGA AATGTATATT 
TACGGGGATG TCAAAAGCGA CTATTTTGAT TGGTGGACAT GGGATATGGT TGAAAGTGAA
ACCTCTGCAA ACCACTTCAG GAATGAGCTT GCCAAATATC CGGATGTTAA AGAGATCAAG
ATTTTCATTA ACAGTTATGG TGGTAGCGTG TTCGAAGGGA CTGCAATCTA TAGCCAGTTA
AGGAGGCACC CTGCACAAAA GACAGTTTAC ATTGACGGCT TTGCCTGTTC TGTGGCCTCC
GTCATAGCAA TGGCAGGTGA CCGAGTGATT ATGCCTAAAA ACACCATGAT GATGATCCAC
AATGCATGGA ATATTGTGGC CGGAAATGCC ACCCAACTAA GGAAGGCAGC AGACGACCTG
GATACCATCA TGGCTGGCAA CCGGCAATCT TACCTCCAGA AATCAAATGG CAAAATAACC
GAAGAAAAAC TCATTGAATT ATTGGATGCC GAGACATGGT TAACGGCTGA ACAGTGTATT
GAATATGGTT TTGCCGATGA GTTGTTGGAG AAAGATGCTG ACCTGACCGA AGCTAAACAA
CTTCTTCAAA AAATGAACAA AACGCTGGAG CAGCAATTAA GTTATAACAG AGCTATAGCG
GTTCAGTTCA GGGAATTGGC TAAGGAACCA ATTCAGAAGA CACCGCCTAG CGAACCACCA
CCGGAACCGC CAAAAGAAAA TAAAACCATA AAATTTATGG CGGCATTGTT CCGCTAA
 
Protein sequence
MKRTWELKQA ATPDTLEMYI YGDVKSDYFD WWTWDMVESE TSANHFRNEL AKYPDVKEIK 
IFINSYGGSV FEGTAIYSQL RRHPAQKTVY IDGFACSVAS VIAMAGDRVI MPKNTMMMIH
NAWNIVAGNA TQLRKAADDL DTIMAGNRQS YLQKSNGKIT EEKLIELLDA ETWLTAEQCI
EYGFADELLE KDADLTEAKQ LLQKMNKTLE QQLSYNRAIA VQFRELAKEP IQKTPPSEPP
PEPPKENKTI KFMAALFR