Gene Dred_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2600 
Symbol 
ID4957559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2826143 
End bp2826928 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content47% 
IMG OID640181785 
Productphi13 family phage major tail protein 
Protein accessionYP_001113935 
Protein GI134300439 
COG category 
COG ID 
TIGRFAM ID[TIGR01603] phage major tail protein, phi13 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATACA TCGGACTAAA ACATCCGGTC TTTGCGCCGA TTGTATCGGA ACCGGCTAAT 
GGTCTACCAA CCTATGGAAC CGGGCTAGTT GTAGGTCGTG CAATTGCTGC AAACGTCTCA
ATCGAGCTAT CTGATAGCAA ATTACCAGCT GACGATACAA TCGTTGAGAT TGATAACAGT
TTTATTTCCG GAACAATTAC AACTGGTATT GATGACCTTT CGGATGAGGC GTTAAAAATT
TGGCTAGGGC AGCAAGCTGC TACTTTGAAT GGAGTGGCTA CTATCAGATC AGCTGCAAGC
TATGAAGCAC CCAATGGAGG TTTTGGTTAT TACCGGGTCC GGAAAAAGAA TGGTGTACGC
TCATACAGGG CCTACTGGTA TTACAAAACC AAATGGGGTA TGCCATCCGA AGATGCTTCC
ACAAAACCAG ATGGAGCTAT TGAGTGGCAA ACACCGGAAG TGCAAGGCAC TATCATGGCT
ACACAGGATA GTGTAAATTC ATGGCGTGAT CAGGCAACTT TTTCAACGGA AGCAGAGGCT
GTTGCATGGT TAAATGAACT GGCCAATATT GGGGAACCGG CAGACAAAGC TAATCTTAAT
GCAACCATTG CGAGTGCTCA GGCTCTTGAC CCAGAAACTT ATACTTCAGT ATCTTGGGTG
GATGTTGCAA ATGCTCTTAG CGATGCTGTT GCTGTGGCTG CTATGGAAAG CCCATCACAG
ACCAGAGTTG ATGATACAAA GAGCCTGCTC GAGACTGCCG TGGCTGCATT GGTGCCCCGG
GTTTAA
 
Protein sequence
MAYIGLKHPV FAPIVSEPAN GLPTYGTGLV VGRAIAANVS IELSDSKLPA DDTIVEIDNS 
FISGTITTGI DDLSDEALKI WLGQQAATLN GVATIRSAAS YEAPNGGFGY YRVRKKNGVR
SYRAYWYYKT KWGMPSEDAS TKPDGAIEWQ TPEVQGTIMA TQDSVNSWRD QATFSTEAEA
VAWLNELANI GEPADKANLN ATIASAQALD PETYTSVSWV DVANALSDAV AVAAMESPSQ
TRVDDTKSLL ETAVAALVPR V