Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2539 |
Symbol | |
ID | 4955582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2763083 |
End bp | 2763964 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640181718 |
Product | peptidase M50 |
Protein accession | YP_001113874 |
Protein GI | 134300378 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0160669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAG GTCACCTATG GGGGATCGAA ATCCACTTTA ACCTGTTGTT CCTTGTTCTT CTAGGACTAT ATTTTGTAGC TGGGGTGTTG GAAAAGGGTT TAATTATTTT TGGGCTGGTA TTATTTCATG AACTAGCCCA TACACTGGTA GCCAAATTCA TGGGGGTACG GGTTATTGAC ATTGAAATAC TTCCCTTTGG TGGCGTTGCC AGAATGGGCG GTGAAATGAG TGTAGAGCCT GGTAAGGAAG TTGCTGTGGC AATGGCGGGT CCAGCCTCCA ATGTCTTATT AATAGGGCTA GCAATGGGAT TAAAAAATTT GGGGATATGG TCCAATGAAT TGGGTCCGTT TTTCTTGCAG ATCAACGTCA TGTTAGCTCT TTTTAATCTT CTGCCGGCCC TTCCCCTTGA CGGAGGCAGA ATATTGCGCT CTTTACTGGC AACCCATGTT GGAGTATCCC AGGCCACACT GACAGCTGCA AGAATAGGTC AAGTAGTTGC CGTGGCGGTG ATCTGTTTAG GTATAATGGG TTTTTTACAA CGAATTGTTG GACTAGATGT GATCATTATT GCTTTTTTTG TTCTTTATGC TGCCACAAAG GAAAAAAATA TGGCACCTTA TCTATTTGTT AGGCATTTGG CTCAGAAAAA GGAGGAACTG ATTCAAGCAG GGATATTACC GGTGGAACAA CTGGTTGTCC GGGAGGATGT TCCCTTAAAG GAGATCGTAA GACTATTTGT GCCCCAGAAG TTTCATCTGA TTCTATTACT AAATAATCAA ATGAATTACT TAGGCCAGAT CAGTGAAGTG CAGGTGGTGG ATGCACTGTT TGACCAGGGC ATGGAAACTC CTATTGGGTT ATTGATAAAG CCCAGAGATT AG
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Protein sequence | MKVGHLWGIE IHFNLLFLVL LGLYFVAGVL EKGLIIFGLV LFHELAHTLV AKFMGVRVID IEILPFGGVA RMGGEMSVEP GKEVAVAMAG PASNVLLIGL AMGLKNLGIW SNELGPFFLQ INVMLALFNL LPALPLDGGR ILRSLLATHV GVSQATLTAA RIGQVVAVAV ICLGIMGFLQ RIVGLDVIII AFFVLYAATK EKNMAPYLFV RHLAQKKEEL IQAGILPVEQ LVVREDVPLK EIVRLFVPQK FHLILLLNNQ MNYLGQISEV QVVDALFDQG METPIGLLIK PRD
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