Gene Dred_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2539 
Symbol 
ID4955582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2763083 
End bp2763964 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content43% 
IMG OID640181718 
Productpeptidase M50 
Protein accessionYP_001113874 
Protein GI134300378 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0160669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAG GTCACCTATG GGGGATCGAA ATCCACTTTA ACCTGTTGTT CCTTGTTCTT 
CTAGGACTAT ATTTTGTAGC TGGGGTGTTG GAAAAGGGTT TAATTATTTT TGGGCTGGTA
TTATTTCATG AACTAGCCCA TACACTGGTA GCCAAATTCA TGGGGGTACG GGTTATTGAC
ATTGAAATAC TTCCCTTTGG TGGCGTTGCC AGAATGGGCG GTGAAATGAG TGTAGAGCCT
GGTAAGGAAG TTGCTGTGGC AATGGCGGGT CCAGCCTCCA ATGTCTTATT AATAGGGCTA
GCAATGGGAT TAAAAAATTT GGGGATATGG TCCAATGAAT TGGGTCCGTT TTTCTTGCAG
ATCAACGTCA TGTTAGCTCT TTTTAATCTT CTGCCGGCCC TTCCCCTTGA CGGAGGCAGA
ATATTGCGCT CTTTACTGGC AACCCATGTT GGAGTATCCC AGGCCACACT GACAGCTGCA
AGAATAGGTC AAGTAGTTGC CGTGGCGGTG ATCTGTTTAG GTATAATGGG TTTTTTACAA
CGAATTGTTG GACTAGATGT GATCATTATT GCTTTTTTTG TTCTTTATGC TGCCACAAAG
GAAAAAAATA TGGCACCTTA TCTATTTGTT AGGCATTTGG CTCAGAAAAA GGAGGAACTG
ATTCAAGCAG GGATATTACC GGTGGAACAA CTGGTTGTCC GGGAGGATGT TCCCTTAAAG
GAGATCGTAA GACTATTTGT GCCCCAGAAG TTTCATCTGA TTCTATTACT AAATAATCAA
ATGAATTACT TAGGCCAGAT CAGTGAAGTG CAGGTGGTGG ATGCACTGTT TGACCAGGGC
ATGGAAACTC CTATTGGGTT ATTGATAAAG CCCAGAGATT AG
 
Protein sequence
MKVGHLWGIE IHFNLLFLVL LGLYFVAGVL EKGLIIFGLV LFHELAHTLV AKFMGVRVID 
IEILPFGGVA RMGGEMSVEP GKEVAVAMAG PASNVLLIGL AMGLKNLGIW SNELGPFFLQ
INVMLALFNL LPALPLDGGR ILRSLLATHV GVSQATLTAA RIGQVVAVAV ICLGIMGFLQ
RIVGLDVIII AFFVLYAATK EKNMAPYLFV RHLAQKKEEL IQAGILPVEQ LVVREDVPLK
EIVRLFVPQK FHLILLLNNQ MNYLGQISEV QVVDALFDQG METPIGLLIK PRD