| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2536 |
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| Symbol | |
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| ID | 4955402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2758683 |
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| End bp | 2760362 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640181715 |
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| Product | ribonuclease |
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| Protein accession | YP_001113871 |
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| Protein GI | 134300375 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00011944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAG AAATTGTTAT TAATGTTCAA GAAGAGGAAA CACGGGTTGC CGTACTGGAA
GACCGGGTGT TGATGGAAGT GTACATAGAG CGTTCTCACA ACCAACGTCT GGTAGGCAAC
ATTTTTAAAG GAAAAGTAGA AAACGTTCTA CCCGGTATGC AGGCTGCCTT TGTTGATATT
GGTTTAGAAA AAAATGCTTT TCTTTATGTA GAAGATGCCC AGCCATCCAG GAACCCTGAA
GCAGCCAATC AATCAGGCTA TCCCGTAAAT ATTGCTGATA TTTTAAAACA GGGTCAAGAA
ATTATTGTTC AAATTGTTAA GGAACCTATT GGTACCAAGG GGCCCAGGGT AACTACCCAT
ATAACCTTGC CAGGCAGGTA CTTAGTCCTC ATGCCCACCG TTGACTACAT TGGTATTTCC
CGTCGTATTG AGACAGAAAA AGAACGGGAG AGGTTAAAGG AGTTAGCCAA CAGAGTAAAG
CCCGAGGGGA TGGGGGTCAT TGTTAGAACG GTGGCTGAAG GGGTGGATGA AGAGGAGTTT
TTGCAAGATA TTATTTTGCT GACAAAACTT TGGCGAAGAA TTCAGAACTG TGCAGCCAAC
TGTTCTGCAC CTAACCTATT GCATCGAGAC GTGGAATTGG TGCAAAGGAT GTTACGAGAC
GTTTTTAGTG AAGATGTTGA TCGTTTAACG GTGGATTCTC GTAGTGAGTA TGAGAAGACT
CTGGAAATCC TAGATATGAT TGATTCCCGC TTAAAGCTGA AGGTTTTTTT GGATGAGCGT
GAAAATATTT TTGAGGACTA TGGAATATCC ACTGAAATGG AAAAGGCACT TAAAAGGAAA
GTATGGTTAA AATGTGGTGC CTACTTAGTA ATAGATCAAG CCGAGGCCCT GACGGCCATT
GATGTAAATA CAGGGAAGTT CGTAGGCAGT ACCACCCTAG AAGATACTGT GCTAAAAACT
AATCTAGATG CTGCTGTAGA AATTGCCCGT CAACTTCGTT TGAGAAATAT TGGTGGTATT
ATCATTGTTG ATTTTATCGA TATGGTTGAA GAAGAACACC GGAGTCAAGT ATTAAGCACC
CTAGAAGAGG AAATAAAAAA AGACAAAACA AAAACCAATA TTTTAGGAAT CACACAACTG
GGTTTAGTGG AAATGACCCG AAAAAAGGTG CGTCCATCTC TGGCAGAAGT GGTTCAAAAA
TCTTGCCCCT ATTGTGAAGG TCGAGGTAAG GTGCTATCTG AAGAAACCGT TGGCATTAAG
CTAAAGAACC AGATTTATCA ATTGGCGCGC CAAACACTGG CTGATACCAT TTTAGTTGAG
GCGAACCCCG TTGTGGCTGC TAGAATCATT GGGGCTGGTG GGGCCAACCT ACGGGAATTG
GAGCAGAAAA CTGGCAAGAA TCTTTATATT CGAGGTTCTG CCACTCATCA CCTTGAACAA
GTCACTATCA AGCCTCTTTC AGACCAAGAA GAAATCTACT CTCAAACGGT CCCTGTAAAG
GCTGGTGAAA TTATTGAGGT CAAAGTGGAA GAACCCCACA TATCCAATCC CAGTGACGGT
ATCGCTCGCC TAGATGGTTT TATTATTGAT GTGGATGGGG GAGGGGCCCT GGTGGGAGAA
CTGGTCTCAG TGGAGGTAAT CAAGGTGCAC CGGACCTATG CAAAGGCACG TTTGGTTTGA
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| Protein sequence | MLKEIVINVQ EEETRVAVLE DRVLMEVYIE RSHNQRLVGN IFKGKVENVL PGMQAAFVDI
GLEKNAFLYV EDAQPSRNPE AANQSGYPVN IADILKQGQE IIVQIVKEPI GTKGPRVTTH
ITLPGRYLVL MPTVDYIGIS RRIETEKERE RLKELANRVK PEGMGVIVRT VAEGVDEEEF
LQDIILLTKL WRRIQNCAAN CSAPNLLHRD VELVQRMLRD VFSEDVDRLT VDSRSEYEKT
LEILDMIDSR LKLKVFLDER ENIFEDYGIS TEMEKALKRK VWLKCGAYLV IDQAEALTAI
DVNTGKFVGS TTLEDTVLKT NLDAAVEIAR QLRLRNIGGI IIVDFIDMVE EEHRSQVLST
LEEEIKKDKT KTNILGITQL GLVEMTRKKV RPSLAEVVQK SCPYCEGRGK VLSEETVGIK
LKNQIYQLAR QTLADTILVE ANPVVAARII GAGGANLREL EQKTGKNLYI RGSATHHLEQ
VTIKPLSDQE EIYSQTVPVK AGEIIEVKVE EPHISNPSDG IARLDGFIID VDGGGALVGE
LVSVEVIKVH RTYAKARLV
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