Gene Dred_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2523 
Symbol 
ID4955946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2742618 
End bp2743559 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content46% 
IMG OID640181699 
Productinner-membrane translocator 
Protein accessionYP_001113858 
Protein GI134300362 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGCC CAAGGAACAT AATTCAGCGC TATCACTTAG GGCCATTTCT AGGATTATTA 
ATCATTATCG TAGCCTTAAC CTTCTTATCC GACCGATTCT TTACCACATC AAATCTATTG
AATGTAGCTA GGCAGGTGTC CATTAATACC CTGTTGGGTG TGGGCATGAC CTTTGTAATA
CTAACTGGTG GAATTGACCT TTCGGTAGGA TCCATCTTGG CTTTAGCCGG TGCCTTGGGG
GCAGGTTTTT TGGGACAAGG AAACACTACC TTAATGGTTG TGTTGTATGC CTGTTTGATT
GGTCTACTGG CAGGAACTGT AAATGGAACC ATCGTGGCCT ATGGGAGGGT GGCACCCTTT
ATTGCAACCT TGGCAACCAT GACATTATTT AGGGGTGCCA CCCTCATTTA TACCGAAGGA
AGACCCGTGC GTGCTGTGGC CGAAGGCTTT AATGAACTAG GGGGAGGGTA TTTAGGAGCC
ATACCAACAC CCGTCATTAT TACCAGTGTT ATTGTACTTC TGGCCTGGTT TGTATTAACC
CAGATGACTC CCGGCAGAAG AATCTTTGCC CTGGGGGGAA ACGAAGAGGC AGCTATTCTA
AGTGGTATAC GAACCAACCA CTATAAAATT ATGGTTTACT CTATTAGTGG TTTATTGGCC
GGGTTGGCGG GAGTTATTTT ATCTTCCAGA TTGTTGTCTG CCCAGCCCAC CGCAGGCATA
GGCTACGAGT TAGATGCCAT TGCTGCTGTG GTTATTGGTG GCACCAGCTT AACTGGAGGG
CAGGGCGGTG TAATCGGTAC TTTAATTGGT GCTTTAATCA TTGGAGTGAT CGATAATGGT
TTAAATCTGC TAAACGTGTC TTCCTTCTAC CAGCAAGCTG TCAAAGGTCT TATCATTTTG
GTTGCGGTTC TGTTAGACCG ACGGAATGCT GTGGGGAGGT GA
 
Protein sequence
MGSPRNIIQR YHLGPFLGLL IIIVALTFLS DRFFTTSNLL NVARQVSINT LLGVGMTFVI 
LTGGIDLSVG SILALAGALG AGFLGQGNTT LMVVLYACLI GLLAGTVNGT IVAYGRVAPF
IATLATMTLF RGATLIYTEG RPVRAVAEGF NELGGGYLGA IPTPVIITSV IVLLAWFVLT
QMTPGRRIFA LGGNEEAAIL SGIRTNHYKI MVYSISGLLA GLAGVILSSR LLSAQPTAGI
GYELDAIAAV VIGGTSLTGG QGGVIGTLIG ALIIGVIDNG LNLLNVSSFY QQAVKGLIIL
VAVLLDRRNA VGR