Gene Dred_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2506 
Symbol 
ID4955254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2726553 
End bp2727593 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content43% 
IMG OID640181682 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_001113841 
Protein GI134300345 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATT ACAAAGGTTT GATCAACAGC CTACAGCGGG GGGTTGTTTC TCCGGTATAC 
TTGTTTTATG GAGAAGAGGA ATACCTGAAA GAAAAGGCTG TGGAGAAATT TAAAGAATTT
TTACTGCCAC AGGCAGCTGA TTTTAACCTG GATCTATTGG ACGGGGAAGA AGCAGACATT
GATACGGTGA TTTCTTTTGC AGAAAACATG CCCTTCATGG CAGAACGCAG ACTGGTCATC
GTAAAAAATG CTCCATGGTT TTCTGGCAAA GGGAAAAATG AAGCCGGAGG CGAGGACAAA
GGAAGTGGTA AGGACACAGT TCTCTTAAAG TATTTAAATA ATCCAGCCAG CACCACTTGT
TTAGTCTTTG TTGCCAAGGA AGCAGTAGAC CGTCGCAAGA AGACCTACAA AGAAATTAGT
GCAAAGGGAC AGGTTATAGA CTTCAAAATG TTAAAGCCCT CCGAAATGAT CACCTGGGTT
AACCAAATTG TCAAAGGGAC TGGTAAAACA ATTGAGCCCT CAGCTGCCAG AGCGATAGTA
GAAGCCAACG GTAAGTTAGG TCTATTAAAT CTAAAGAATG AAGTAAATAA GCTTATCAGC
TATTTGGGTA GCGAACAAGA AATAACCTCC GCCATTGTCG GGGAGGTTGG TGTTATCAAT
ATTGAGCAAA ATATTTTTAC AGTAGTGGAC GATGCTGTGG CTGGCCATAC TTCTAAGGCT
CTAAATGGTA TTCGAGAACT TCTTTCTCTT AAGGAACAAC CGACTAAAAT TTTAGCCCTT
TTAGCGCGAC AACTTCGCAT CGCCCTCCAG GCCGAGGCCT TACTTCGGGA AGGCTCCCCT
GAGAGAGAAG TTGCTAGAAA AATGGGAATA CATGATTTTG TTATCAAAAA GGCCTTAACA
CAAATTCGAC GGGGGGGGTC CCAGAGAATG AAATGGGCCT TGCAAGAAAT TGCAACTATT
GATGCCGCTA TAAAAAAAGG CCAGAGAGAT TTTCTACCAG CCATTGAAAC CATGTTAATT
CAATTCGGCC AAATGGAGTA G
 
Protein sequence
MEYYKGLINS LQRGVVSPVY LFYGEEEYLK EKAVEKFKEF LLPQAADFNL DLLDGEEADI 
DTVISFAENM PFMAERRLVI VKNAPWFSGK GKNEAGGEDK GSGKDTVLLK YLNNPASTTC
LVFVAKEAVD RRKKTYKEIS AKGQVIDFKM LKPSEMITWV NQIVKGTGKT IEPSAARAIV
EANGKLGLLN LKNEVNKLIS YLGSEQEITS AIVGEVGVIN IEQNIFTVVD DAVAGHTSKA
LNGIRELLSL KEQPTKILAL LARQLRIALQ AEALLREGSP EREVARKMGI HDFVIKKALT
QIRRGGSQRM KWALQEIATI DAAIKKGQRD FLPAIETMLI QFGQME