| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2501 |
|---|
| Symbol | |
|---|
| ID | 4957819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2722168 |
|---|
| End bp | 2723973 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640181677 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_001113836 |
|---|
| Protein GI | 134300340 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000290099 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACCC CCCAAAATCG TATTAGAAAT TTTTGTATTA TAGCACATAT TGACCACGGT
AAGTCAACCC TAGCCGATAG AATACTGGAG GAAACCGGTG CCCTTTCCCA AAGGGAAATG
ACTGAGCAGG TACTAGATAA GATGGATCTG GAGCGAGAAC GAGGTATTAC CATTAAGCTG
CAGGCTGTTC GTTTGTTCCA CAGGGCCGAA GACGGCCAGG AGTACCAGCT TAATTTAATT
GATACCCCCG GTCACGTTGA CTTTACCTAT GAAGTGTCAC GTAGTTTGGC CGCCTGTGAG
GGTGCTCTGT TGGTGGTGGA TGCTTCCCAG GGAATTGAAG CCCAGACCTT GGCCAATGTT
TATTTAGCAC TGGAAAATGA CTTGGAAATT ATCCCGGTAA TTAATAAAAT TGACCTACCC
AGTGCGGAAC CAGAGCGGGT CAAACAGGAG ATAGAGGACG TAATCGGTTT GGATACTTCC
GAGGCAGTGC TGGCCTCTGC GAAAACTGGT GCTGGGATCA AAGAAATTCT GGAGCAGGTG
GTTACCAAGA TTGCCCCCCC TAAGGGTGAC TCCGAAGCTC CCCTGCAGGC CCTGATCTTT
GACTCCCACT ATGATGCCTA CCGAGGTGTG ATAGCCTACA TTCGTGTGGT TCAGGGAACC
CTCAAACCTG GTATGCGCAT ACGAATGATG GCCACCAAGA AAGAGTTTGA AGTAACCGAA
GTGGGGGTTT TTACCCCCCA TATGACCTTT GTGGATGAAT TAAAGACCGG CGAAGTTGGG
TTAGTGGCTG CCAGCATGAA AAATGTACAG GATGTGCGGG TGGGTGATAC CATTACCGCT
GCCCAAAATC CTGCTCCGGC ACCTCTGCCC GGTTACCGTA AAGTTACCCC AATGGTATTC
TGCGGTCTTT ATCCCGTGGA TACTGTAGAC TATGAAGACT TACGGGATGC CCTGGATAAA
CTAAAGTTAA ATGATGCTTC TTTAATTTAT GAACCAGAAA CATCCGATGC CTTAGGTTTT
GGTTTTCGCT GCGGCTTTTT AGGTCTGTTG CATATGGAAA TTATTCAGGA ACGTTTGGAG
CGGGAATATG GCCTAAGTCT AATTACCACG GCACCCAGTG TAGTCTACCG GGTGACCACC
ACCAAGGGTG AAGTCATGGA AATCGACAAC CCCGCCAATC TGCCTCAGGT CAATAAAATA
GAAATTATCG AAGAACCCTT TGTCAAGGCC ACTGTTATGG TACCTAAGGA TTTTGTAGGA
ACCGTCATGG ATCTCTGCCA GGGTAAACGG GGTATTTTTA GTAATATGGA GTACTTGGGA
ATTAACCGTG TTATGTTAAC CTATGAAATT CCTCTGTCTG AAATAATTTA TGACTTCTTC
GATCAATTGA AATCCCGGAC CAAGGGTTAT GCTTCCCTGG ACTACGAAAT GATTGGCTAT
CGGCAATCCG AGCTGGTTAA AATGGATATT ATGCTAAATG GTGAAGTTCT AGATGCCCTG
TCCTGTATTG TTCATAGTGA AAGAGCTTAC ACGCGGGGAC GGGCCCTGGT AGAAAAGCTT
CGTTCGTTAA TTCCCCGGCA GATGTTTGAG ATTCCGGTAC AGGCGGCCAT TGGTAATAAA
ATTATTGCCA GGGAAACCGT TAAGGCCATG CGCAAGGATG TACTGGCAAA ATGCTATGGC
GGTGACATTA GCCGTAAGAG AAAACTGTTG GAGAAGCAAA AAGAAGGTAA AAGGCGCATG
AAGCAAGTGG GTAACGTGGA GATACCCCAG GAGGCCTTCA TGGCTGTTTT AAGTATTGAA
GAATAA
|
|---|
| Protein sequence | MSTPQNRIRN FCIIAHIDHG KSTLADRILE ETGALSQREM TEQVLDKMDL ERERGITIKL
QAVRLFHRAE DGQEYQLNLI DTPGHVDFTY EVSRSLAACE GALLVVDASQ GIEAQTLANV
YLALENDLEI IPVINKIDLP SAEPERVKQE IEDVIGLDTS EAVLASAKTG AGIKEILEQV
VTKIAPPKGD SEAPLQALIF DSHYDAYRGV IAYIRVVQGT LKPGMRIRMM ATKKEFEVTE
VGVFTPHMTF VDELKTGEVG LVAASMKNVQ DVRVGDTITA AQNPAPAPLP GYRKVTPMVF
CGLYPVDTVD YEDLRDALDK LKLNDASLIY EPETSDALGF GFRCGFLGLL HMEIIQERLE
REYGLSLITT APSVVYRVTT TKGEVMEIDN PANLPQVNKI EIIEEPFVKA TVMVPKDFVG
TVMDLCQGKR GIFSNMEYLG INRVMLTYEI PLSEIIYDFF DQLKSRTKGY ASLDYEMIGY
RQSELVKMDI MLNGEVLDAL SCIVHSERAY TRGRALVEKL RSLIPRQMFE IPVQAAIGNK
IIARETVKAM RKDVLAKCYG GDISRKRKLL EKQKEGKRRM KQVGNVEIPQ EAFMAVLSIE
E
|
|---|
| |