| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2500 |
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| Symbol | |
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| ID | 4957823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2720798 |
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| End bp | 2721934 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640181676 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001113835 |
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| Protein GI | 134300339 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000623828 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAATAG GTGTGTACAT CCATGTACCC TTTTGTGTTC GCAAATGTCT ATACTGTGAT
TTTACTTCCT ATCCAGTCAA CCGGGAACAG GTATCTCTGT ATCTCCGGGG ACTGGAGAAG
GAAATTGCTT ATTACAGTGA ATCCCTTTTG TTAAAGGAAA AAACAATTAA TACAATTTTT
GTGGGCGGCG GTACGCCCAC TTCTCTTATG TCCGGGCAAC TGGCCAGCAT TTTGGAACGG
CTGGACCGTT CCTTTTATAT TGCCAATGAT GCAGAAATTA CCACCGAGGC TAACCCAGGA
ACTGTGAATT TTTCTTACCT TAAGGACCTC AGGGCAGCCG GTTTTAACCG GCTGAGTCTG
GGGGTACAGT CCACCCACCA AGAACTTCTA AATGAAATTG GTCGCATCCA TAATTTTGAA
CAAGCCAAGG CAGCTGTTTG GCAGGCCCGG CAAGCAAGCT TCCACAATAT CAATTTGGAC
CTTATTTTTG GTTTACCCAA ACAAACAGTT AAACAATGGC AGCAGTCTTT AACTGAAATC
ATAAACCTAG AGCCGCAACA TATTTCTTGC TATGGGCTGC AGTTGGAAGA AGGAACCCCC
TTAACCTGTT CCATAGAACA GGGCAAGTTG GAGCCTTGCC AAGAAGAGGA CGAACTGGAA
ATGTATCAGC TGGCAATACG TATACTGGGA TCAATGGGTT ATGAGCACTA TGAAATCTCA
AATTTTGCCC GCCCAGGTTA TCAATGCCGG CATAATCTAT TATATTGGCA CAATGGGGAA
TACTTGGGCC TCGGCCCTGC GGCCCATTCT CATTTAAATC AGGTACGTTG GGGTAATGTG
GGGAATATTG AGCAATATGC CTCTTTACTG AAAAGGGGCG ATATACCTAG GGAAGAGAAA
ACAATACTTT CCGTCAGGGA GCAAATGGAA GAAACAGTTT TCCTGGGCTT ACGAATGTTA
AAAGGATTAA AGCTAGAGAA CTTTCGAATG CGTTTTGGGT TACCAATTAC CAAAGTTTTC
AAGAAAGAAA TTAGCCGGAT GGAGCAACTA GGTTTAGTAA AATTAGAGGA TGGTTATCTT
AAATTAACAG AGAAAGGTTT ACCACTGGCA AATCAAGTTT TTGCTGAGTT TGTATAA
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| Protein sequence | MSIGVYIHVP FCVRKCLYCD FTSYPVNREQ VSLYLRGLEK EIAYYSESLL LKEKTINTIF
VGGGTPTSLM SGQLASILER LDRSFYIAND AEITTEANPG TVNFSYLKDL RAAGFNRLSL
GVQSTHQELL NEIGRIHNFE QAKAAVWQAR QASFHNINLD LIFGLPKQTV KQWQQSLTEI
INLEPQHISC YGLQLEEGTP LTCSIEQGKL EPCQEEDELE MYQLAIRILG SMGYEHYEIS
NFARPGYQCR HNLLYWHNGE YLGLGPAAHS HLNQVRWGNV GNIEQYASLL KRGDIPREEK
TILSVREQME ETVFLGLRML KGLKLENFRM RFGLPITKVF KKEISRMEQL GLVKLEDGYL
KLTEKGLPLA NQVFAEFV
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