| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2495 |
|---|
| Symbol | |
|---|
| ID | 4957743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2714281 |
|---|
| End bp | 2715402 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640181671 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | YP_001113830 |
|---|
| Protein GI | 134300334 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0561427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGC GAGATTATTA TGAGGTGCTG GGCCTAAGCA AAGGTGCCTC TGCGGATGAG
ATAAAGAAAG CGTACCGTAA GCTGGCCCGG CAGTACCACC CCGATGCCTA CCAGGGTGAT
AAAGCAGAGG CAGAAACAAA GTTTAAGGAA ATTGCCGAAG CCTATGCGGT ACTAAGTGAT
CCTGAAAAAC GGACCTCCTA TGACCAATTC GGTCATGCTG CCACCGATGG CCAGGGTTTT
GGCGCAGGTG GTTTTGGAGG CTTTAACGGT GACTTTGGTG ATATCTTTGA CATGTTTTTT
GGTGGTATGG GACGCCAGCG TAACGGCCCC CAAAAAGGTA ATGACTTAAG AGTTAACATG
GAGATATCCT TTAAGGAAGC TGCCTTTGGT GTAGAAAGGG ACATTCAAGT TCCACGCACG
GAGAACTGCG ATACCTGCGG TGGATCTGGT GCAGCGCCGG GAAGCAGTAC TAAGACCTGT
GGTACCTGTC ATGGCTCCGG GCAGGTACAA TATGCAGCCA ACTCTCCCTT CGGCCGTATT
GTGCAAAGCC GCACCTGTGA CAAGTGTCAT GGAACGGGAA AAATTATAGA AAAACTCTGT
CCCACTTGCC GTGGTGCAGG TCAGATCAGA AAAACAAAAA GTATACACGT GAAAATTCCT
GCCGGAGTGG ATGAGGGATC TCGCCTCCGT CTTAGTGGCG AAGGGGAGGC AGGTCTTCGC
GGTGGTCCGC CCGGAGACCT CTACGTCTAT ATTCTGGTTC GACCTCATAA ATTCTTCCGC
CGGGAAGGTA ATGAAGTGGT TTGTGATATG GAAATCTCCT TTGCCCAGGC AGCCCTGGGG
GATGTCTTAG AAGTTCCCAC TCTAGATGGT TCCGCTGACT TAAAGGTGCC AGAGGGAACA
CAAACAGGTA CCATTTTCCG CATTAGGGGA AAAGGAATTC CTTATCTGAA TGGAAGTGGA
CGCGGTGATC AGCACGTTCG TGTAAGGGTT GTAACTCCCA CCCGACTAAA TGAAAAGCAA
AAGGATCTAC TGCGGGAATT TGCAAAAATG AACGATGAGA AACTACCCAA AGGGTCGGAA
AAAAATATAT TTGAGAAAAT GAAAGATGCC TTTAAGGGGT AA
|
|---|
| Protein sequence | MAKRDYYEVL GLSKGASADE IKKAYRKLAR QYHPDAYQGD KAEAETKFKE IAEAYAVLSD
PEKRTSYDQF GHAATDGQGF GAGGFGGFNG DFGDIFDMFF GGMGRQRNGP QKGNDLRVNM
EISFKEAAFG VERDIQVPRT ENCDTCGGSG AAPGSSTKTC GTCHGSGQVQ YAANSPFGRI
VQSRTCDKCH GTGKIIEKLC PTCRGAGQIR KTKSIHVKIP AGVDEGSRLR LSGEGEAGLR
GGPPGDLYVY ILVRPHKFFR REGNEVVCDM EISFAQAALG DVLEVPTLDG SADLKVPEGT
QTGTIFRIRG KGIPYLNGSG RGDQHVRVRV VTPTRLNEKQ KDLLREFAKM NDEKLPKGSE
KNIFEKMKDA FKG
|
|---|
| |