Gene Dred_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2483 
Symbol 
ID4957598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2703450 
End bp2705609 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content44% 
IMG OID640181659 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001113818 
Protein GI134300322 
COG category[R] General function prediction only 
COG ID[COG1480] Predicted membrane-associated HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATCGC TAAAACAAAT TGGTGGAGGC CTGATCAAAG GCCTTAAATA TCTTTTTCAA 
AACAATGGGT TTAAACGTTA TTTCGCTGCA GGTTTGTTTT TTTTGATTTT TACATTGTTG
GTATCCTTTG AATTTGTACC TCAAAAGGTA AATCTACAGG TTGGTCAGAT TTCTCCTACA
ACAATCTATG CACCCAGAGC GGTTGTATAC ATTGACCAGC AGAAAACAGC GGAGGAACGC
CGAAAAGCGA TAGAAAAGGT ACCTAAGGTA CCCGAGATCA ACCTAGGTGT TTTGGAAACT
GTCCAAAAAG ATATCAACAA CGTATTAAAA CAAGTCAAGG CAACCCAAGC AGATACAGAA
AAAGAAGTCC CTGAAAAAGT TGCTCGGCTA AAATCGATTA TACCCTTTGT CATGCCCGAA
TCGGTATTCA ATCAATTGGC CGTGGGTAAC CCCACCAGCA CAGATCAACT GTCAGCAGGT
ATTTCTGAGG CCCTTTCAGA AATCATGAAT CAAGAAGAGG GGATTACGGC CAATCAATTA
GAAGAGGCAA AGGAAAAGGC TGCTGCTAAA ATTGCAGCCA GACAATTTGA TGAATCATAC
CGATTACTAG GGCAGGGATT AATCAAACAA TTCTTAAGGG CAAATGCCTA TTTTGATGAA
GAAAAATACA AATTACTTCA ACAAGAAGCG GCTGAGAGTG TGCCACCTGC CAGGGTTAGT
ATTCAATACA AGGAAAGAAT TTTAACCCAG GGGGATGTGG TAACCGAAGA GCATATGGCT
AAGTTGCAGG CCCTGGGCTT ATCCAGACCC CAACATACCT TCACCACCAT CATGGGCACA
GGACTGCTGG TGGCCTTAAT GATGGCTTTG GTATTGCTCT ATACCTACAT ACACAATAAG
GAGATTTACC ATAACAGAAG CTATCTTAAC CTCGTCGGAA TTATTGCCCT CATTATACTG
GTGGTTTCCC GGGGGGTTAT GGCCATAACC ATTAGCCAAT GGCCTGAATT TGGTGCATTG
TTTGGCTACT TGGCACCCCT AGCTGCATCA GGGATGTTAA TTACCATTCT TTTGGATTCA
CGTTTGGCAA TGTTAATGGT TTTTAACTTG GCTTTATTGC TAGGGGTTAT GTCCGGAAAC
CAGTTTCACT TTGCCTTAGT TGGTTTTGTG GGTGGGGTCA GCGGCGTTTA CAGCGTCTCC
AAATTAAGTC AAAGGGGAGA TCTGGTCCGA GCAGGCATTT ATGTTGGCGC AGCCAATGTG
ATTATTATTT CTGTGGTGGG CCTGATTACA GGATTACCCT GGTATTTACT AATCACCTCA
GCCTTTTCCC TTGGCATTGC CAACGGTTTG CTGTCGTCCA TTTTGACTAA CGGCGCCCTG
CCATATCTAG AAACCAGTTT TGGTATTACC TCGACGGTTA GGTTGTTGGA GCTATCTAAC
CCCAATAACC CATTGTTAAA AATGTTGATG ACAGAGGCAC CGGGTACCTA TCACCACAGC
ATTTTGGTAG GCAATCTGGC AGAAGCAGCT GCAGAAAGTG TAGGGGCTGA GCCGCTGGTG
GTAAGGGTAG GCGCTTACTA CCACGATATA GGTAAAATTA AAAGACCCTA TTTCTTTATC
GAAAACCAGC TGGGCGGAGA TAATCCACAC GATAAAATTG CCCCTACACT AAGTACACTG
ATTCTTACCT CCCATATTAA AGATGGTGTA GAACTGGCCC GGGAGTATAA ACTACCCCAG
GTGATTACAG ACATCGTGGA GCAGCACCAT GGAAAAAGCT TAGTCCGCTT CTTTTATCAC
AAGGCAATGG AAGGAGATCG TGCGGAATCC GTTAACGAAG AAGATTTTCG TTACGAAGGG
CCTAAACCAA GAACCAAGGA AGCCGCCATT GTTATGTTGG CAGATAATAT AGAGGCAGCT
GTTCGTTCCC TGCAGAATCC TACATCCGGC AGGGTAGAGG GATTGGTTCG TAAGATTATT
AAAGATCGAT TGATGGATGG TCAGTTGGAC GAGTGTGATT TAACATTGAA GGATTTGGAT
GCAATAGCCA ATAGCTTCTT GCGGGTACTC TCTGGTATTT TCCATAACCG AATTGAGTAT
CCTGATATGA AACAGGAGAT GGAAAGGAGA AAGACTCGGT ATGGCGGTAC TCGTAAATAA
 
Protein sequence
MLSLKQIGGG LIKGLKYLFQ NNGFKRYFAA GLFFLIFTLL VSFEFVPQKV NLQVGQISPT 
TIYAPRAVVY IDQQKTAEER RKAIEKVPKV PEINLGVLET VQKDINNVLK QVKATQADTE
KEVPEKVARL KSIIPFVMPE SVFNQLAVGN PTSTDQLSAG ISEALSEIMN QEEGITANQL
EEAKEKAAAK IAARQFDESY RLLGQGLIKQ FLRANAYFDE EKYKLLQQEA AESVPPARVS
IQYKERILTQ GDVVTEEHMA KLQALGLSRP QHTFTTIMGT GLLVALMMAL VLLYTYIHNK
EIYHNRSYLN LVGIIALIIL VVSRGVMAIT ISQWPEFGAL FGYLAPLAAS GMLITILLDS
RLAMLMVFNL ALLLGVMSGN QFHFALVGFV GGVSGVYSVS KLSQRGDLVR AGIYVGAANV
IIISVVGLIT GLPWYLLITS AFSLGIANGL LSSILTNGAL PYLETSFGIT STVRLLELSN
PNNPLLKMLM TEAPGTYHHS ILVGNLAEAA AESVGAEPLV VRVGAYYHDI GKIKRPYFFI
ENQLGGDNPH DKIAPTLSTL ILTSHIKDGV ELAREYKLPQ VITDIVEQHH GKSLVRFFYH
KAMEGDRAES VNEEDFRYEG PKPRTKEAAI VMLADNIEAA VRSLQNPTSG RVEGLVRKII
KDRLMDGQLD ECDLTLKDLD AIANSFLRVL SGIFHNRIEY PDMKQEMERR KTRYGGTRK