Gene Dred_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2459 
Symbol 
ID4956198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2675265 
End bp2676380 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content47% 
IMG OID640181631 
Producthypothetical protein 
Protein accessionYP_001113794 
Protein GI134300298 
COG category[S] Function unknown 
COG ID[COG3323] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAG CCAGGGAGAT TGTTTCAATG CTAGAACAAA TCGCCCCACG CCATCTGGCA 
GAGGAGTGGG ATAACAGCGG CTGGCAGGTG GGAGATCCTG CTGCTGGGGT TAGCAAAGTA
TTACTAACCC TGGACGTAGA TGCTGTAGTA GTGCGGGAAG CGGTGGAAAA GCAGGTTAAC
CTGATTATTA GCCATCACCC GCTGTTGATG AAAGGTATTA AAAACATCCG CTTGGATGAA
CCCAAGGGGG AATTGATTGC CCAATTAATT AAAAATAACA TTGGGCTTTA TGCTGCCCAT
ACCAACTTGG ACAGTGCTGC AGGCGGAGTT AATGAGCAGT TGGCTAAACG ACTGGGATTG
CAAAATATAG AGGTTCTCCA CCCTGCCAAG GGAGAAAAGC ACTTAAAACT AGTTGTATTT
GTACCTGTAC AACAGGTGGA AGGGGTGCAG AGGGCCATAT CCCAAGCTGG TGCTGGTTGG
ATCGGTAACT ATAGTGATTG CACGTTCAGT GTTCAGGGGG AAGGAACCTT TCGTCCACTG
GAGGGAACCA ATCCCTTTAT TGGACAGCAG GGACAGTTGG AACAGGTGGC GGAAAGCCGC
CTGGAAACCA TTGTACCAGC CAGTAAAATC AAAACAGTTC TCAAAGCTAT GCTAGAGGCA
CATCCCTACG AAGAGGTGGC CTATGATCTG TATCCCTTGG AGAATCAGAC CAGCAATGCG
GGCTTAGGAA GAATTGGACA TTTAGCAGAA ACCCAGAGTT TTGCAGATTT TATCATTGCA
GTCAAAGAAG CTTTGGGATT GGCCTCAGTT AAGGTTGGCG GCAGCATGTG GAAGGATGTA
CGAAGAATCG CTGTTTGTGG TGGCTCCGGA GCAGAGCTCT GGCCCATTGC ATTTGCCAAA
GGGGCCGATG TCTATATAAC TGGCGATATT AAGTATCATA CTGCCCAAGA TATGCTGGCG
TCTGGTTTAA ATTTTATTGA TGCCGGTCAT TTTGCCACCG AGCACGTTAT TTTACCGGAG
TTACAAAGAA TACTGTCCGA GGCCTGTGTC AAGAAAAATT TGGTTGTAGA ATTTATGCTA
ACAAAACGTC AATCTAACCC TTTCATGTTT TTATAG
 
Protein sequence
MSTAREIVSM LEQIAPRHLA EEWDNSGWQV GDPAAGVSKV LLTLDVDAVV VREAVEKQVN 
LIISHHPLLM KGIKNIRLDE PKGELIAQLI KNNIGLYAAH TNLDSAAGGV NEQLAKRLGL
QNIEVLHPAK GEKHLKLVVF VPVQQVEGVQ RAISQAGAGW IGNYSDCTFS VQGEGTFRPL
EGTNPFIGQQ GQLEQVAESR LETIVPASKI KTVLKAMLEA HPYEEVAYDL YPLENQTSNA
GLGRIGHLAE TQSFADFIIA VKEALGLASV KVGGSMWKDV RRIAVCGGSG AELWPIAFAK
GADVYITGDI KYHTAQDMLA SGLNFIDAGH FATEHVILPE LQRILSEACV KKNLVVEFML
TKRQSNPFMF L