Gene Dred_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2458 
Symbol 
ID4955995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2674446 
End bp2675165 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content38% 
IMG OID640181630 
Producthypothetical protein 
Protein accessionYP_001113793 
Protein GI134300297 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.223806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATA CTCGTAATTT GTGGCAATTA CAACTTCTGG AAAAATACCA TAAAAGCATG 
TCAGGTAAAA AGCCCGGGAA TGAAATTATA CAGCAACTGC AACAATTAAA AAAAGAAATT
GAAGCAGGTC AAATGCAACT CAAAGAATTA AAAACTCATT ATCAACGGAT CAAGGAACAA
AGTTTTGAGT TGGAACAGAA ATCTAAGGAA ACCAGAGGAA AATGTGAACA AATCAATGCA
AAAATCTATG ACGGAACCCT CCATGTGAAG GAAATACAGG GTTGCCAGCA AAGGGTGGAG
CGTCTAAAAC AGGATATTTC ACGGCTTGAA GACCTGGAGC TGGAAAAAAT GCAAATTAAA
GAAGATATTA AAAAGCAGTG GGAAAGTAAA AAAGGGACCC TGGAATTATT AAAGACCAAG
TATAAGGAGC TACACAGTCG GTACTTGCAA GAAAAAGAAG AAATAAAAGA ACGGACCGCG
GAGACGGCCC GTAAGATGGA AGAATTAATT CAGAATGTAG ATAAAGATCT ATATAAGCAA
TACCGGCAAC TGAAAACAAA GTTCCCAGAT CCCGTGGGGC GTGTTACCAA AGATGCCTGT
TCAGGTTGCC ACCTTGGTAT TTCCTTTGAC AAAGTAAAGG AACTTAAATA TGAGAAGGGT
TTGGTTTACT GCAATCATTG TGGTCGTATT TTGTTTTGGG ACCCCCAAAT GCTAGATTAA
 
Protein sequence
MNYTRNLWQL QLLEKYHKSM SGKKPGNEII QQLQQLKKEI EAGQMQLKEL KTHYQRIKEQ 
SFELEQKSKE TRGKCEQINA KIYDGTLHVK EIQGCQQRVE RLKQDISRLE DLELEKMQIK
EDIKKQWESK KGTLELLKTK YKELHSRYLQ EKEEIKERTA ETARKMEELI QNVDKDLYKQ
YRQLKTKFPD PVGRVTKDAC SGCHLGISFD KVKELKYEKG LVYCNHCGRI LFWDPQMLD