| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2454 |
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| Symbol | |
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| ID | 4956005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2669074 |
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| End bp | 2670660 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640181626 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001113789 |
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| Protein GI | 134300293 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.269908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCGTA AGAAAAGTTT TTTCATGCTG TTGCTGGTAT CTTTGCTGGC AGTGGCCATG
GTTGGCTGTG GCGGCGGTGA CAACAAAGAA AAGGCTGCTG ACAAAGCCAA GCAAAAGGTA
TTTGTTTTTG GCCAGGGTTC CGATCCCAGG GGCTTGGATC CGGCTTTTGT TGATGATGGT
GAATCTGCCA ACCCTATTGT CAATATTTAT GACGGTCTTG TTCGTTATAA AACTGGCAGC
ACTGAGATTG AACCTGCCTT GGCTACCGAG TGGTCTTCCT CAGAGGATGG CAAAGAATGG
ACCTTTAAGT TACGTCAAGG CGTAAAATTC CACGACGGAA CCCCCTTTAA CGCCGATGCG
GTGGTATTCA GCGTAAACCG TCAATTGCCT CCTAATCGAA CCGATGCTAT GCCCTATGCT
TCCTTTACCT TTGGTCCTGT GGAAAAGATT GAGAAAGTGG ACGACTACAC AGTTAAGTTT
ATCCTCAACG AGCCCTATGC TCCCTTCTTG GCTAACCTGG CAATGGCTCT GGCTGCCCCC
ATCGTTAGCC CTGCAGCCGT TGAAAAATAT GGTGACAAAT TTATTGAGAA CCCTGTTGGT
ACCGGACCCT TCAAGTTTGT TGAGTGGAAA AAGGGTCAGC AAATCGTGTT GGAAGCCAAC
AAGGAATACT GGGGTGGCGC TCCCAAACTT GACAAACTGG TTTACAAGTT TATTAAAGAA
AACTCTGTAC GTGCCAGTGA GTTAAGAACC GGGTCCATTC AGGCCATGAA CGGCGTGGAC
CCTAACGATG TGAAGATGTT GGAAGAGGCA GGTCTGAATG TAATCAAAAA CCCCGGTATG
AATATCAACT ACCTGGCGTT TTTCTGCAAC AAGAAGCCCT TTGACAATCC TAAACTACGT
TTAGCTGTTG CTCATGCCAT TAACCGTGAG AACTTAATCA ACTTCCTGTA CCAGGGTCTG
GCTGAGCTTC CTAATAGTAT GCTGCCCAAC TTTATGCCCG GACATGATAA GTCCCTGCAG
GCTCCTGAGT ATAACCCTGA AAAGGCCAAG CAACTGCTGG CCGAAGCAGG TTATCCCAAT
GGCTTGAAGG TTACCCTGTT AACCTACTCC ACCGTGCGTC CTTATAACCC CGTGGGTGGA
GATAAACTGG CTGCTGCTGT ACAAGCTGAT CTACGTAAAG TAGGGATCGA AGCAGAAATT
AAAACCTATC CTTGGAAAGA ATACAAGGAA ATTTATACCC CTGAAGTTGT TGAGGCCGGC
GACATGATGC TCTATGGCTG GATTGGTGAC AATGGTGACC CGGATAACTT CTTATCTTTG
CTGGAAACCA AGGAAATCAA GAGCACTCTG AATGCTGCCA AGTACTCCAA CAAGCAGGTA
GATGAACTGC TAATGAAAGG TCGTACCGCC CGAACTCAGG AAGAGCGGAA CGCTGCTTAC
AGTGAATTGC AAAAAATTGT ACAGGCCGAA GCTCCCTGGG TGTTCATTAG CCACAGTAAA
GATATGGCTG CTGTAAGCAA GAAAGTAGAA GGCTTTGATC TACACCCCGT AGGTGTTGTA
TACTTCCGTG ATGTAGATAT CAAGTAG
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| Protein sequence | MFRKKSFFML LLVSLLAVAM VGCGGGDNKE KAADKAKQKV FVFGQGSDPR GLDPAFVDDG
ESANPIVNIY DGLVRYKTGS TEIEPALATE WSSSEDGKEW TFKLRQGVKF HDGTPFNADA
VVFSVNRQLP PNRTDAMPYA SFTFGPVEKI EKVDDYTVKF ILNEPYAPFL ANLAMALAAP
IVSPAAVEKY GDKFIENPVG TGPFKFVEWK KGQQIVLEAN KEYWGGAPKL DKLVYKFIKE
NSVRASELRT GSIQAMNGVD PNDVKMLEEA GLNVIKNPGM NINYLAFFCN KKPFDNPKLR
LAVAHAINRE NLINFLYQGL AELPNSMLPN FMPGHDKSLQ APEYNPEKAK QLLAEAGYPN
GLKVTLLTYS TVRPYNPVGG DKLAAAVQAD LRKVGIEAEI KTYPWKEYKE IYTPEVVEAG
DMMLYGWIGD NGDPDNFLSL LETKEIKSTL NAAKYSNKQV DELLMKGRTA RTQEERNAAY
SELQKIVQAE APWVFISHSK DMAAVSKKVE GFDLHPVGVV YFRDVDIK
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