Gene Dred_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2429 
Symbol 
ID4958431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2644340 
End bp2646481 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content43% 
IMG OID640181601 
Productflagellin domain-containing protein 
Protein accessionYP_001113764 
Protein GI134300268 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTA ACCATAATAT TGCAGCCCTT AACACATATC GTCAGTTAAG TATCAATGGC 
GATAATGGAA GCAAAGCTTT AGAGAAATTA TCATCTGGTC TGCGCATTAA CCGTGCCGGC
GATGATGCTG CTGGTTTAGC TATCTCTGAA AAGATGCGTG CTCAGATCCG AGGCTTAGAT
CAAGCTAGTC GTAACGCTCA AGATGGTATT TCCATGATCC AAACTGCTGA AGGCGCACTG
AATGAGACCC ACAGTATTCT GCAGCGTATG CGTGAACTAG CAAACCAGGC TGCTAACGAT
ACCAACGTAA ACGTTGACCG CGATGAAATT CAAAAGGAAA TTAACCAGCT AACCTCAGAG
ATTAACCGTA TTGGTAACAC CACCGAATTT AACACACAGA AATTACTGAA TGGCGGACGT
CAGATTACAG CAAATGCTAC CAAATCCGGT GTTGCACTTA CAGGTGGATC AGCAGCAGCT
GCTACTAATG CTTCCGTAAC AGGTGGTGTG AATGGTACTG ATGCTGTAGC CGCAGTTTGG
GATTCAGGGG CAATCAATGT AGGTGCGGGT GTTGCTGATA CAGAGACATT TACATTTGGT
GGAGTGACAG TAACTCTAAA AGTCGGTGCG GTTACAACTG GTAACCTTTC TTCTACAGCC
GGAAATGCTG TTACCTTGGA TATTAATACC GCAGATATTG CCGATGCTAC AAAATTAAGG
GACGGTTTAG TAGCTGCTTT TAATGCTGCA GCTGCAGTAG GTGGAAGTCC AATTGCGGAC
ATTTCGTTTT CTGCTGAAGG TACAGGTTTA AAGGCAACAG GTACGCTAGC TCAAGGTGCT
ACAAACAATG CTTTTGAATT TGCAGAGACT TCAACCAACG CATCCTTTGG TAACGTTGGT
GCTACTGCTC AACAAAGTAA CGGTGTTGGT GTAGCTGGTG TTACAGGTGT TGCTGCAACA
GGTGTGATTA CCTTTACTAA CGTTGCTCAA GAGGGTTCTT TCATCACATT GGCTGATAAG
AAAATTGCAT TTTGGGATAG TGGAAATACT ACCTACGCTA ATTCTGTTGA AGCAAAAGCT
GCATTACAGG CTGATTTTGT AGTCGATGTA GCTAGTGCAG CAAATGCTAC AGACATGGCA
ACAGCAGTGG TTAACCAGGT GGGCGCAAGT GGAATAAATG GCTACACACT TTCCAATGCT
GCTGGTGTAC TTACTCTTAC CGCAAATGCT GATGGTGCAT TCTCAGGTAG CACTAGAGCC
AGTGTTACAG ATATTACTGC AACCGCAGCT GCAACAGGCA GTTTTAACTT TGATGGAACA
CCTACTGAGG GTTCAATTAT TACAATAGGT GATCAAAAAA TTGGCTTTTA TGATAGCTCT
TTAGGAAATT ATACAAGTGA TGCAACAGCC AAATCAGGGT TAGAGACTAA TTTTGCTATC
GATGTTAAAG GCTTAACAGC AAAAGAAACT GTGGATAAGT TATTAGCGCT ACAATCGGAT
CTTAATGCTA AATTGGTAAA TGATGTTAAT CTAGGTAAAA ACTTTAGCTC AGATGGAACG
GTAAACTTGG TTGTTACTTC AGCTTCAACT GGGTTTGCTG GGAATACTAT AAAGCTTGAT
GTAAGTAAGG ATGCAACTGC TGATTTTAAG GCTACAATGC AAATTGGTGC AAATACAGCT
CAAAGCTTCT CTATCGATAT TAAAGATATG CGTGCTAAAG CCCTTAAAGT GAGTGGAGAT
ACTTCAGAGG GTGCTGTAAC AGCTAAGAAT GGATCAGTAG CTAATTACGT AAAACTCGAA
AATGTTTCCA ATGGAACTGA CAATAAAAAT GTTGAATTTG CATTGGATGT TTCTACCCAT
ACAAAAGCCA CGGCAGCGGT AAGTGTCATT AACGATGCTA TTGAGGCAGT TTCTGCCGAA
CGTTCCAAGC TTGGAGCCTT CCAGAATCGT CTGGAGCACA CTATTAACAA CCTGGGTACC
TCCAGCGAAA ACTTAACCGC TGCTGAATCC CGTATCCGTG ACGTAGATAT GGCTAAGGAA
ATGATGGAGT TCACCAAGAA CAACATCCTC TCCCAGGCAG CTCAGGCTAT GCTGGCACAA
GCCAACCAAC AGCCTCAAGG CGTACTGCAA CTGCTTCGTT AA
 
Protein sequence
MRINHNIAAL NTYRQLSING DNGSKALEKL SSGLRINRAG DDAAGLAISE KMRAQIRGLD 
QASRNAQDGI SMIQTAEGAL NETHSILQRM RELANQAAND TNVNVDRDEI QKEINQLTSE
INRIGNTTEF NTQKLLNGGR QITANATKSG VALTGGSAAA ATNASVTGGV NGTDAVAAVW
DSGAINVGAG VADTETFTFG GVTVTLKVGA VTTGNLSSTA GNAVTLDINT ADIADATKLR
DGLVAAFNAA AAVGGSPIAD ISFSAEGTGL KATGTLAQGA TNNAFEFAET STNASFGNVG
ATAQQSNGVG VAGVTGVAAT GVITFTNVAQ EGSFITLADK KIAFWDSGNT TYANSVEAKA
ALQADFVVDV ASAANATDMA TAVVNQVGAS GINGYTLSNA AGVLTLTANA DGAFSGSTRA
SVTDITATAA ATGSFNFDGT PTEGSIITIG DQKIGFYDSS LGNYTSDATA KSGLETNFAI
DVKGLTAKET VDKLLALQSD LNAKLVNDVN LGKNFSSDGT VNLVVTSAST GFAGNTIKLD
VSKDATADFK ATMQIGANTA QSFSIDIKDM RAKALKVSGD TSEGAVTAKN GSVANYVKLE
NVSNGTDNKN VEFALDVSTH TKATAAVSVI NDAIEAVSAE RSKLGAFQNR LEHTINNLGT
SSENLTAAES RIRDVDMAKE MMEFTKNNIL SQAAQAMLAQ ANQQPQGVLQ LLR