Gene Dred_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2421 
Symbol 
ID4958224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2638289 
End bp2640295 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content50% 
IMG OID640181593 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001113756 
Protein GI134300260 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTC TTTTTTCACC TGCCCAAATA GGTACACTTC AGCTTCGTAA CCGTATTATA 
ATGACTCCTA TGCATTTAGG GTACACTCCC AATGGAGAAG TCACTGATCA ACTGATTGAG
TTCTATCGAG TTCGGGCCCG CGGTGGTGCT GGCCTTATCG TGGTCGGCGG GTGCGGCATC
GACCGGATCG GAAATGCCTA CGGCATGACT CAACTTGATG ATGATCGCTT CATTCCGGGC
CTGCGCCGTT TGGCAGATGC AGTACAAGCA GAAGGTGCGA AAATCGTGGC ACAGCTTTAC
CAAGCCGGGA GATACGCCCA CTCTGCTTTA ACCGGTCAGC CGGCAGTGGC TCCATCCCCT
ATCCCCTCCA AACTTACAGG TGAAACACCT GTGGAACTTA CTGAAGAAAA AATAGCTGAA
ATTGTTGCCT CATTTGCAAA GGCAGCAAAA AGAGCCAAAA CGGCAGGCTT TGACGGGGTT
GAGATTATTG CCAGTGCCGG ATACCTTATT TCCCAGTTCC TTTCCCCGCT TACCAATAAA
CGCACAGACC GTTATGGCGG AGACCTCCAG GCCCGCATGA CTTTCGGACT CGAAGTGGTA
GCCGCAGTAC GAGAAGCTGT AGGTTCGGAC TATCCCATTA TCGTCCGGGT AGCAGGCAAT
GACTTTATGC CCGGCAGTCA CACTAACACC GAGGCTCAGG TTTTCTGCCA AGCTATGGAA
AAATCCGGGG TAAACGCTAT TAATGTAACC GGTGGTTGGC ATGAAACTCA AGTCCCTCAA
ATTACTATGA ATGTTCCTCC CGGAGCCTAT GCTTACCTGG CCTATGGAAT TAAACAGGCT
GTTTCTATTC CTGTTATCGC CTGTAACCGT ATTAACACCC CTGACCTTGC AGAGGCAATT
CTGCAAGAGG GTAAAGCCGA CTTTATCGGC ATGGCACGGT CGCTCATGGC TGATCCAGAA
CTGCCCAACA AAGCCATGAG TGGACATCCC GAACAAATTC GCCCGTGTAT CGGATGTAAC
CAAGGGTGTT TAGACCACGT TTTTCGCATG AAACCGGTAA GCTGTCTGGT AAATGCAGAG
GCAGGCCGGG AGGCTGAACT GTCACTAACC CCTACCTCCC AACCTGGTAA AATTCTAGTG
ATTGGGGCCG GTGCAGCTGG GCTGGAGTTT GCGCGGGTAG CCGCCCTCCG GGGACACAAG
GTGACAATTT GGGAGGAAAG TGATCAGGCC GGGGGACAAC TGATTTTGGC CGCAGCACCA
CCTGGACGCA AGGATTTCTT ACACCTTAGA ACCTATTTGG TTAATGCCTG CCGGGACCTT
GGAGTAGAAA TTCAGTATCA TACTAAGGCC ACCCCTGAGA ACATTCTGTC TGCCGTTCAA
GAAGGTAAAT TCAATAGGGT AGTTATTGCA ACCGGGGCCC ACCCCATTAC TCCTCCTATC
CCAATTGAAG AAGGAGTAAA GGTCATTCAG GCCTGGGATG TACTAGCAGG TCGCAGCAAA
GCCGGACAAA ACATAATTAT TGTTGGTGGT GGAGCCGTTG GGGTAGAAAC AGCTCTATTA
CTGGCTGAAT CCGGTACTCT GGATAATGAA ACCTTACGTT TTCTCATGCT GCAGCAAGCA
GAAACAGAAA AGGAACTCTA TCGCTTGTTA ATCCAGGGAA CTAAAAAGAT TACAGTTCTG
GAGATGGCCA ACGGAATCGG ACGCGACATC GGTCCCAGTA CTCGCTGGTC CATGCTGGCA
GATTTAAAAC GCCACCAGGT TAACTGTCTG GACGAAACCA CCGTGCTGGA AATTCGCCGG
GAAGGTGTTC TGGTGAAGAA TGCCGGAACT CAAAAGATTC TACCGGCAGA TACAGTAATC
TTAGCCGTTG GCTCCCGTTC CCAAAATGAA CTTTACCAAG CCCTGCAAGG TAAGGTGGAG
TATTTGAGCA TCATCGGGGA CGCAATAAAA CCCCGGAAAG TAATGGATGC AATCCACCAG
GCTTATAATG AGGCGATTAA ATATTAA
 
Protein sequence
MSILFSPAQI GTLQLRNRII MTPMHLGYTP NGEVTDQLIE FYRVRARGGA GLIVVGGCGI 
DRIGNAYGMT QLDDDRFIPG LRRLADAVQA EGAKIVAQLY QAGRYAHSAL TGQPAVAPSP
IPSKLTGETP VELTEEKIAE IVASFAKAAK RAKTAGFDGV EIIASAGYLI SQFLSPLTNK
RTDRYGGDLQ ARMTFGLEVV AAVREAVGSD YPIIVRVAGN DFMPGSHTNT EAQVFCQAME
KSGVNAINVT GGWHETQVPQ ITMNVPPGAY AYLAYGIKQA VSIPVIACNR INTPDLAEAI
LQEGKADFIG MARSLMADPE LPNKAMSGHP EQIRPCIGCN QGCLDHVFRM KPVSCLVNAE
AGREAELSLT PTSQPGKILV IGAGAAGLEF ARVAALRGHK VTIWEESDQA GGQLILAAAP
PGRKDFLHLR TYLVNACRDL GVEIQYHTKA TPENILSAVQ EGKFNRVVIA TGAHPITPPI
PIEEGVKVIQ AWDVLAGRSK AGQNIIIVGG GAVGVETALL LAESGTLDNE TLRFLMLQQA
ETEKELYRLL IQGTKKITVL EMANGIGRDI GPSTRWSMLA DLKRHQVNCL DETTVLEIRR
EGVLVKNAGT QKILPADTVI LAVGSRSQNE LYQALQGKVE YLSIIGDAIK PRKVMDAIHQ
AYNEAIKY