Gene Dred_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2412 
Symbol 
ID4957904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2631943 
End bp2633016 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content47% 
IMG OID640181584 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_001113747 
Protein GI134300251 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAA GAAGCAAAAC CGTTGAGAAA TTTGAAGAGG CCTTTGCCCA AACCATAGGT 
GCTAAATATG CAGTGGCAGT TTCCAACAGC ACCGCTGCCT TCCATGCTGC CCTCTATGCC
GCCGGAGTCA GCCACAAAGA TGAAGTTATT TTATCGCCCC TTGTCCACCC GGAGTTGGCC
CATGCCATTC GTTACCTGGA TGGTGTGCCC ATCTACACCG ATGTCAATGC CCAAACCGGC
TTGCTGGACC CCGCAGCGGT TCGCTGGCGT ATTACTGCCA ATACCAGAGC TGTGATTGCC
ACCCACTATG CCGGGCAACC CTGTGACATG GATGCCCTTG CCAAAGTTAC AGCAGGCAAA
GAAATTGTGA TTATTGAAGA TGCCTCCCAG GCCCTGGGGG CAAGTTATAA GGGAAAAAAG
ATTGGTACAG TGAGTTCCCT AACGGTATTT GATTTTTCCC ATAAACAGGG TCTCTATACC
GAATTGGGTG GTATGGTGGT AACGGATTCG GCAGAGTACT ACCATTGGCT GACATTATTC
CGGGATACCG GAATAAGAAG GGATAAGACA GAACTGGTGA AAGAAGAAGG ACCCTGGCAC
TTTGAAGCCC AGGAAATTGG CTTTAATTAT CGTATGACCA GTATGCAAGC AGAAATGGGG
TTGCAACAAC TCATAGATAT TGAGCAAGTA CATGCTGGTC GTCAGGAAAT GGCGGAAAAA
TATTTGGCTG CATTGGCAGA GACAGCTGGC TTACAACTAC CCATTCAAAA CCAGGATAGT
CACGGAGCAT GGTACTCCTT CCCGGTGCTT CTTAAGGGAG AACACCTTAT TGCCCGGCGA
AAGGAGCTCG TAGAAATCTT ACTACAGCAG GGAATACCAG TGGATGTTCA ATATTACCCC
ATTTATTTGC ATCCCATTTA TTTATGGCAG GGGCATCCGG ATGTCTGCAC TGTTGAAGGT
CCCCTCTGCC CGAGGGCCGA AGACTTTTAC AGAAGAGTCG TAAATTTACC TATTTTGCCA
TATATTGACA AACAATGCAT AAAGAAAATT GTTGAAATAT TTAATAAATT ATAG
 
Protein sequence
METRSKTVEK FEEAFAQTIG AKYAVAVSNS TAAFHAALYA AGVSHKDEVI LSPLVHPELA 
HAIRYLDGVP IYTDVNAQTG LLDPAAVRWR ITANTRAVIA THYAGQPCDM DALAKVTAGK
EIVIIEDASQ ALGASYKGKK IGTVSSLTVF DFSHKQGLYT ELGGMVVTDS AEYYHWLTLF
RDTGIRRDKT ELVKEEGPWH FEAQEIGFNY RMTSMQAEMG LQQLIDIEQV HAGRQEMAEK
YLAALAETAG LQLPIQNQDS HGAWYSFPVL LKGEHLIARR KELVEILLQQ GIPVDVQYYP
IYLHPIYLWQ GHPDVCTVEG PLCPRAEDFY RRVVNLPILP YIDKQCIKKI VEIFNKL