| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2408 |
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| Symbol | fliF |
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| ID | 4957771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2628811 |
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| End bp | 2630376 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640181580 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001113743 |
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| Protein GI | 134300247 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTTTA ATGACCTGCT GGAGAGACTT AAACAGCGGT GGCAGGAAAC AAGTCAAAAC
AGAAAAGTAT TGGTCATCCT GGTAAGCACA GTTGTTCTGG CAGGTTTGGT GTATTTGGCA
ATGACATTGA CAAAACCCAA TTATGCAATT TTGCTGGGAG ACTTGGAACC AAAGGATGCC
GGAGATATTG TTGCACAACT GGAAAGCGAA AAGATTCCTT ACCAGTTAAT TGATCAAGGA
ACAACCATTC TCGTTCCCCA GGAGCAAGTG GACGAGATTC GGGTGAAGTT AGCCAGTGAT
GGCTTGCTGA CAGGAGTGGG GAATGGCTTT GAGCTATTTG ATAAAAGTAA ATTCGGAGAA
ACGGATTTCG AACAACAAAT ATCCTATCAG CGGGCTCTTC AAGAGGAACT AAGACGTACT
ATTACTAAGG TGGAGGGTGT TGAACAAGCC CGGGTACACC TGGTATTGCC CCGGAAAAGT
GTTTTTATTG AGGAGGAGGG AACTGCTTCG GCCTCGGTGG TGGTAAAATT GAAGCCCCGG
GCTAAACTGA AAGCGGAACA GGTCAAGGGC CTTAATGACC TGATTATCGG CAGCGTAGAA
GGTTTGCAAG CGGAGAACGT ACATATCATT GACACCGAAG GAAATGTCTT AAACGATTTT
CTTAAGGATT CTTCCGGGAC CCCTGGGAAT GGCTTTTCTG GAACAATTTT GGAACGACAA
CAGCAGATTC GCCGGACCTA CGAAAAAGAA TTAGAGAACC GGGTACAAAA TATGCTGGCC
AAGGTATTGG GACCCAATAA AGCAGTGGCT ATGGTTACAG CAGAAATGGA TTTTAACCAA
CTGCAAACCA ATACCACTGA GGTTGTGCCA GGTCAAGTGG TCAGCGAGAG AAGTATCAAG
GAACAAGGCA GTGATGGTAG TGGCGGCGGG GTGACTGGTT CAACCACGCA AATGCCCGGT
CAGAGTATTC CCGCCGAGAC TTCAACCAGT CAAAATAGTT ATATCAAGAC CGATGACACC
AAGAATTACC AACATGGAAC CAGAACCCAA TCAGAGGTGC AGGCACCGGG TAAGTTGATT
AAGCTTTCCA CTGCGGTGGT TCTGGATGAA TCGGTGAAAA ATCTGGATCG AACACAGGTT
GAAAAGATTG TAACCGCAGC CATTGGTTTT GATGATCAAC GGGGTGATCA GATTACGGTA
TCTGCCATGA CCTTTGATCG AAGCCAATAC GACTTAGACC AGGATTTGCC TGATAACAGC
CAAAAGGAAA AAGAACTATT TTATATGACC ATTGCAGCGG TTGTGGGAGG CTTACTGCTT
CTGTTGCTTC TGGTGGCTTA TTGGCTACGT CGGCGTAGAA AGAACGCAGA ACAAGAATTG
CAGGTTATTG AAGAAACTAC GCCAATGCCA ATTGAGAGTG TGACTACTAA GGAAGAAGAG
GAAGAAGAGG AAGAAGCCCA GTGGGAAATT CCTCCGCCCA AGGATAAACA AAAGCAGTTA
AAGGAACTGG CCCAAGAACG ACCCGATGAT ATTGCCTCGG TACTGAAAGT ATGGCTTAGG
GAATAG
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| Protein sequence | MNFNDLLERL KQRWQETSQN RKVLVILVST VVLAGLVYLA MTLTKPNYAI LLGDLEPKDA
GDIVAQLESE KIPYQLIDQG TTILVPQEQV DEIRVKLASD GLLTGVGNGF ELFDKSKFGE
TDFEQQISYQ RALQEELRRT ITKVEGVEQA RVHLVLPRKS VFIEEEGTAS ASVVVKLKPR
AKLKAEQVKG LNDLIIGSVE GLQAENVHII DTEGNVLNDF LKDSSGTPGN GFSGTILERQ
QQIRRTYEKE LENRVQNMLA KVLGPNKAVA MVTAEMDFNQ LQTNTTEVVP GQVVSERSIK
EQGSDGSGGG VTGSTTQMPG QSIPAETSTS QNSYIKTDDT KNYQHGTRTQ SEVQAPGKLI
KLSTAVVLDE SVKNLDRTQV EKIVTAAIGF DDQRGDQITV SAMTFDRSQY DLDQDLPDNS
QKEKELFYMT IAAVVGGLLL LLLLVAYWLR RRRKNAEQEL QVIEETTPMP IESVTTKEEE
EEEEEAQWEI PPPKDKQKQL KELAQERPDD IASVLKVWLR E
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