Gene Dred_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2406 
Symbol 
ID4957725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2627076 
End bp2627792 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content50% 
IMG OID640181578 
Productflagellar biosynthesis/type III secretory pathway protein-like protein 
Protein accessionYP_001113741 
Protein GI134300245 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTAAGG TTATTAAAGG AGCACCTATA GAAGAAGTTG CTTGGTTAAT ACCCCTCAAG 
GAGCTTCCCC CACCACCCTC TGAGGAAGTT AACCAGGAGA AGCAGCTTTC CCCAGAGGAA
ATAATGGTCC TTGCACAGCA GCAGGCAGCG GAAATGATAA ACCGGGCCAA ACAAGAGGCA
AAACAGATCA TTCAGCAGAC CCAATCCAAG GCAGAGGCCG AAGCCCGGCA AATGAGGGAA
CAGGCGAAGC AGGCTGGCTG GCAGGAAGGA ATCACAGCTT CCCAAGCCGA GGCCGAAAAG
ATCCGCCAGC AGGCCAGTGA TGTTTTAAGG CAGTCCAAAG AGATTTATCG TCAAACCCTC
GGGAAGATGG AAGCAGAGAT TGTCGACTTG GCGGTGGATA TTGCAGAACG GGTGGTACTG
ACACAATTGG CCGTGGAACC CCGCACCATT ATGGAAATTG CCCGGGAATG TATGGATATG
GTAAAAAATA AACCTCTTGT TAATCTATAC GTAAACCATG CGGATTATCA GATGGTACAA
GAGGGAAAAA ATGAACTGCT TCAGGGGTTG CCGGGTAAAG TGGAAATGAA CATATTGGTG
GATAATGGCA TAACCCCCGG GGGTTGCCGC ATTGAGACAG ATCAGGGACA GGTGGATGCT
ACCCTGGAAA CCCGCTGGCA GGAAGTATTC AAAGTGCTTT ACGGGAAAGA GGAGTGA
 
Protein sequence
MFKVIKGAPI EEVAWLIPLK ELPPPPSEEV NQEKQLSPEE IMVLAQQQAA EMINRAKQEA 
KQIIQQTQSK AEAEARQMRE QAKQAGWQEG ITASQAEAEK IRQQASDVLR QSKEIYRQTL
GKMEAEIVDL AVDIAERVVL TQLAVEPRTI MEIARECMDM VKNKPLVNLY VNHADYQMVQ
EGKNELLQGL PGKVEMNILV DNGITPGGCR IETDQGQVDA TLETRWQEVF KVLYGKEE