| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2396 |
|---|
| Symbol | fliP |
|---|
| ID | 4957304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2617902 |
|---|
| End bp | 2618675 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640181568 |
|---|
| Product | flagellar biosynthesis protein FliP |
|---|
| Protein accession | YP_001113731 |
|---|
| Protein GI | 134300235 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
|---|
| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCAGAA AGAAAAAGAT TAACGCATGG ATCATCATAG TATTGACAGC ATTGTTACTT
TTCCTGATTC CCAATGGGGT TTTTGCGGAA CCCCTTATTC CTATACCCAG TATTAACTTA
AATGTAGAGA CTGCCCAGGA GCCTCAGCAG GTGGTAGACA GCGTAAAACT GCTGATTTTT
TTAACCCTAC TGTCCATGGT CCCTGCATTT TTAATGATGT TAACTTCCTT TACGCGGATT
ATTGTGGTAC TTTCTTTTTT GCGCAGTGCC CTGGGTACAC AGCAGACGCC TCCGAATCAA
GTGTTAATTG GCTTGGCCCT TTTCCTGACG ATTTTTATTA TGAATCCGGT GTATCAGGAT
ATAAATAAGA ATTCCATACA GCCTTATTTA GCCAACCAAT TAACCTATGA GCAAGCAACG
GATCAAGCTG CTAAACCCCT AAGGAATTTT ATGGTAAGGC AAACCCGCGA GAAAGACCTA
GGGTTGTTTT TAAACATTGC CAAAATGGAC AAACCCAAAA ATGCAAATGA AGTGCCGATG
AGTGTATTGG TACCAGCCTT TGTCATCAGT GAGTTGAAAA CAGCCTTTCA AATCGGCTTT
ATCCTGTTTG TCCCATTTCT AGTCATCGAT ATGGTGGTTG CCAGTACCTT AATGTCCATG
GGGATGTTTA TGCTACCGCC GGTGATGGTT GCACTGCCCT TTAAATTGCT TCTCTTTGTC
ATGGTGGATG GTTGGTATTT GGTGGTAAAA TCTTTGGTGG AAAGTTTTCG ATAG
|
|---|
| Protein sequence | MVRKKKINAW IIIVLTALLL FLIPNGVFAE PLIPIPSINL NVETAQEPQQ VVDSVKLLIF
LTLLSMVPAF LMMLTSFTRI IVVLSFLRSA LGTQQTPPNQ VLIGLALFLT IFIMNPVYQD
INKNSIQPYL ANQLTYEQAT DQAAKPLRNF MVRQTREKDL GLFLNIAKMD KPKNANEVPM
SVLVPAFVIS ELKTAFQIGF ILFVPFLVID MVVASTLMSM GMFMLPPVMV ALPFKLLLFV
MVDGWYLVVK SLVESFR
|
|---|
| |