| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2393 |
|---|
| Symbol | |
|---|
| ID | 4957195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2615777 |
|---|
| End bp | 2616841 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640181565 |
|---|
| Product | flagellar biosynthetic protein FlhB |
|---|
| Protein accession | YP_001113728 |
|---|
| Protein GI | 134300232 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
|---|
| TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB
[TIGR01404] type III secretion protein, YscU/HrpY family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAG GTTCTCAGGA AAAAACTGAA CAGGCGACGC CCAGGCGATT GCAGGAGGCC
CGACGTAAAG GTCAGGTGCC TAAAAGTGCC GACCTAAACG GGGCCATCCT GCTTCTCATA
ACGGGGTTGT TCGCTCTCCT TTATAAGGAT AATTTAATTA CCCATATGCA GACCTATTTC
TTTACTTATT TTAATAATTT TGTTAAACAG CAACAGCAAG ACAGCTATTT AGTGCAGATA
TTAATTGACT TTATGATCAA TGTCTTTGTT GTTTTTACCC CACTTTTTAT CTTATTAATG
GTGGTGGCCC TGGGTGTAAA CTTGGCCCAG GTGGGATTTC TGTTTGCGCC GGAGGCCATT
AAACCCAAGC TTGATAAACT GAATCCCATC AATGGCCTGA AAAATATGTT CAGTGGCCGG
GCCATGTTTG AACTGGTAAA ATCTCTTTTG AAAATTACCA TTGTCGGTTG GGTGGTCTAT
GCAGCGGTCA GGGGTGAAAT GGCTAATCTG CTGGCAATCT TTCATTCGCC GCCCCGGACC
CTGCTGAATC AGGTGTTAAC CATTGCATTA AAAGTGATCC TTTGGGGAGC GGTGGTTTAT
CTGGGGATTG CACTGTTGGA TTTATTATAC CAGCGCTACG CCTTTCAAAA GCAAATGCGC
ATGAGCAAGC AAGAAGTGAA AGAAGAGTAC AAACAGACCG AGGGGGACCC GCAAATTAAG
GGTTGGCTCC GTCGGCGGCA GCGACAATTG CTTGCCAATC TGGCACGTAA AGAAGTACCC
CAGGCCACAG TGGTTGTTAC CAACCCCACC CACTATGCGG TGGCTCTAAA ATATGAACAA
CCCATGGATG CTCCTGTGGT GGTGGCTAAA GGTACTGACC ACATGGCCAG ACAAATTCGG
GAAATTGCCC GGAAAAATGA AGTCCCGGTT ATCGAAAACG TCGAAGTGGC CCGCTTTTTA
TATGCCAATG TTGAAATTGG CCATGCCATA CCCATGGAAA TGTTTCAGGC AGTGGCAGAA
ATTTTAGCAA TGGTTTACCG GATGAAGAAC AAAAGTTTTT TTTAA
|
|---|
| Protein sequence | MPEGSQEKTE QATPRRLQEA RRKGQVPKSA DLNGAILLLI TGLFALLYKD NLITHMQTYF
FTYFNNFVKQ QQQDSYLVQI LIDFMINVFV VFTPLFILLM VVALGVNLAQ VGFLFAPEAI
KPKLDKLNPI NGLKNMFSGR AMFELVKSLL KITIVGWVVY AAVRGEMANL LAIFHSPPRT
LLNQVLTIAL KVILWGAVVY LGIALLDLLY QRYAFQKQMR MSKQEVKEEY KQTEGDPQIK
GWLRRRQRQL LANLARKEVP QATVVVTNPT HYAVALKYEQ PMDAPVVVAK GTDHMARQIR
EIARKNEVPV IENVEVARFL YANVEIGHAI PMEMFQAVAE ILAMVYRMKN KSFF
|
|---|
| |