Gene Dred_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2387 
Symbol 
ID4956983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2609407 
End bp2610180 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID640181559 
Producthypothetical protein 
Protein accessionYP_001113722 
Protein GI134300226 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGAG GATTATATAT CACCATGAAC AGCCTGAATG TCCAACAGGC GAAATTAAAT 
AATGTTACCA ATAACCTGTC GAACCTCTCG ACAACCGGTT ATAAGAAAAA TAATATGGTG
GATAGTCAAT TTGCCGAATC CCTGCAGTTG GCTTTGGAAA ACCATGGCCC GGGAGGAAAA
CGACAACCCA TTGGGAAGGG TATTTTAGGG AATATGATTA CTCAAGTTCA TATCGATTAC
GGACAGGGAC CCCTTACGGA AACGGGAAAG CTGACGGATA TGGCCTTAGA AGGAAACGGT
TATTTTGTAG TAGAGGATGA AAATGGCGAA CAATTTTTAA CCCGGGACGG CTCTTTCCAT
GTCAATGAGG AGGGGGCCTT ATTAACCGGC GACGGCTTCC GGGTACTGGG CGAAGGCGGA
CCCATTATCC TTGAAAAACC GGAAGATTTT ACCCTTAAGG AAGATGGTAC CATTATGGTG
GGACAGGGTA CAGAAGCAGA AGAAATTGAT AAACTGCAAA TTGTGGAAGT TTCAGAGCCT
GCTCTTTTGA AAAAAACCGA TGGTAATTAT TTTCAAGATC CCGAGGGAGT TGCAGAAGCG
GCTGTTTCAA CCACAGTCAC CCAAGGCTGG TTAGAAAAGT CCAATGTGGA CCCAGTACAA
GAAATGATTA ATATCATCCC CGTGGCTCGT ATTTACGAGT CCAGCCAGAA GTTAATACAA
ATCCAAGATG AGCTTTTGGA TAAAGCTATC AATCAGGTGG GGCGAGTGAA ATAA
 
Protein sequence
MLRGLYITMN SLNVQQAKLN NVTNNLSNLS TTGYKKNNMV DSQFAESLQL ALENHGPGGK 
RQPIGKGILG NMITQVHIDY GQGPLTETGK LTDMALEGNG YFVVEDENGE QFLTRDGSFH
VNEEGALLTG DGFRVLGEGG PIILEKPEDF TLKEDGTIMV GQGTEAEEID KLQIVEVSEP
ALLKKTDGNY FQDPEGVAEA AVSTTVTQGW LEKSNVDPVQ EMINIIPVAR IYESSQKLIQ
IQDELLDKAI NQVGRVK