Gene Dred_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2385 
Symbol 
ID4956935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2608023 
End bp2608523 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content46% 
IMG OID640181557 
ProductCheD, stimulates methylation of MCP proteins 
Protein accessionYP_001113720 
Protein GI134300224 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1871] Chemotaxis protein; stimulates methylation of MCP proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTAG CAAAGGGAAA TGCGGAAATA CAGGTCGGGA TAGCCGACTA CAAGGTCGCA 
GCTTCCCCCA ATCGCCTGAT AACCCTGGGA TTGGGTTCCT GTGTTGGGGT GGTGCTTTAC
GATCCTGTTA AAAAAGTCGG AGGGCTTTTA CACATAATGC TCCCGGACAG TACACAATTT
AATAATGTTA CAAAACCTGC CAAGTTTGCG GATACGGGAA TACCGTTGAT GATTGATGAA
ATTAAACGGT TAGGCGGTAT CCCCAGTAGG CTAACGGCTA AATTAGCCGG CGGAGCCCAA
ATGTTCTCAG GCTTGGACGA AAAATTTGTT TTAAATATTG GTCAGCGTAA TTCTAAAATG
GTAAAGGAGA TTTTGTCTCG TATGGGAATT CGCATACTGG CAGAAGAATT GGGTGGCAAT
CGTGGTAGAA CCATGATCTT TGATATAGCC AGCGGCCAGG TCACCATACG GACCATTGGT
TCTCCATTGA AGGTGATATA G
 
Protein sequence
MELAKGNAEI QVGIADYKVA ASPNRLITLG LGSCVGVVLY DPVKKVGGLL HIMLPDSTQF 
NNVTKPAKFA DTGIPLMIDE IKRLGGIPSR LTAKLAGGAQ MFSGLDEKFV LNIGQRNSKM
VKEILSRMGI RILAEELGGN RGRTMIFDIA SGQVTIRTIG SPLKVI