Gene Dred_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2380 
Symbol 
ID4956723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2603947 
End bp2605182 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content44% 
IMG OID640181552 
Productflagellar motor switch protein 
Protein accessionYP_001113715 
Protein GI134300219 
COG category[N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAC TATTAAGCCA GGAAGAAATT GACGCTTTAA TGAAAGGGCA AGACCTGGGA 
AATGAACCGG ATCCTCTGGG GAATCAGTCA GAAATGTCTG ATACAGTAAT TGAACCGGAA
AATACGCAGC CTAACTTGGC TAAACCAGAA GCATTGGCAG AGGAAGCGAA TTATTGTAGT
CTAATGACCT TGGAAGAAAT GGATGCCCTG GGGGAGATTG GCAATATCTC AATGGGCTCG
GCCTCCACAA CTCTGTCAGA ACTTTTAAGC CAGAAGGTAA ATATCACCAG CCCAAGGGTT
AAGATACAAA CAAAACAGCA ATTATTCGAT TCCTTTAATA TTCCTTATCT CGTCATCAAG
GTTGACTTTA ATGAAGGATT AAACGGTTAT AATGTATTGG TGATTAAGCT TAATGATGCT
GCCACTATGG CCAGCTTAAT GATGGGGGGA GATGGTACCC CCATGTCCGA AGAAATCTCG
GAATTAGAAA TTAGTGCAGC ATCCGAAGCC ATGAATATGA TGATTGGAAC TGCGGCAACA
TCCCTGTCTC AAATGTTCCA ACGGACCATT AATATATCAC CGCCCCAAAC AAATTTGTTA
AGATCAAAGG GAGATCCACT GGCTCAACCA CCCCAGGATA TCGAAGATGT TATTGTTGTG
GTTTCCTTTG ATATGAAAAT TGGAGATCTG GTGGACACAG AGATTATGCA GATTATGTCG
GTGGAGACTG CCAAAGAAGA AGCCCATCTT TTGCTGAAGG ACATTATGGG AGGCACAGAA
GAGCAGGTGG AAGCTCCCAT GGTGCCAACA GAAGCAGCTA CGTCAGCCAC CAGCATACCT
GGATCTGACG ATAGGGAATC GGATGAATTG GCTGGCATAA TGATGCAGGA AACAGCACCT
CCTCCGACTC CTGCCATGCC GCCGCAAGCA GCACCGATTA AACAGACGTC CTTGGCTTCC
CTGGAACAAA GAAACTTGGA TTTAATCTTA GATATTCCGC TAAAGGTAAG TGTTATTCTG
GGCAGAACCA AGCGTCCCAT TAAAGATGTG TTGAAAATTG CTCCGGGATC AGTGGTGGAG
CTGGATTCTC TGGCTGATGA ACCAGTGGAT ATTCTGGTAA ACGGAACCCT GGTGGCTACT
GGAGAAGTGG TGGTGGTTAA CGAAAATTTT GGTATTCGTA TCACCAATAT CATTAGTCCC
ATGGAACGGG TTAAACGGTT AAGTAAATAT AATTAG
 
Protein sequence
MSKLLSQEEI DALMKGQDLG NEPDPLGNQS EMSDTVIEPE NTQPNLAKPE ALAEEANYCS 
LMTLEEMDAL GEIGNISMGS ASTTLSELLS QKVNITSPRV KIQTKQQLFD SFNIPYLVIK
VDFNEGLNGY NVLVIKLNDA ATMASLMMGG DGTPMSEEIS ELEISAASEA MNMMIGTAAT
SLSQMFQRTI NISPPQTNLL RSKGDPLAQP PQDIEDVIVV VSFDMKIGDL VDTEIMQIMS
VETAKEEAHL LLKDIMGGTE EQVEAPMVPT EAATSATSIP GSDDRESDEL AGIMMQETAP
PPTPAMPPQA APIKQTSLAS LEQRNLDLIL DIPLKVSVIL GRTKRPIKDV LKIAPGSVVE
LDSLADEPVD ILVNGTLVAT GEVVVVNENF GIRITNIISP MERVKRLSKY N