Gene Dred_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2374 
Symbol 
ID4956615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2598888 
End bp2599730 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content42% 
IMG OID640181546 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001113709 
Protein GI134300213 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.201878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTTA CTGTATTAGT GGATAACAAT ACGATTATTG ATCGGTATTT GATTGGAGAG 
CCAGGTTTGT CGTTCTTTTT GGAAACCGGG GGAAAGCGAA TCCTGTTTGA TACTGGTTAT
TCAGATGCAT TTATACAAAA CGCAGGAAAG ATAGGGATCA ATCTTCGGGT ATTAGACTAC
GTTGTACTCT CCCACGGGCA TATGGATCAT ACTTGGGGCT TAGATCCCCT TATACGGCTT
TATACAGAAG CCATCATAGA AAACCAAGCG GGGATGTTAA AACCTGTGGT TGTGGGACAT
TCTGATGTTT TCTATAGCAA ACGATTAAAG GGAATGGGGG AAATAGGGAG TACTGTGGCA
AAGAGCAAAC TCTCCCAACA CTTTGAACTC AAGCTGTTGA AAAATCCCCT TTGGCTTACT
GAAAAACTAG TTTTCCTAGG TGAAATACCA AGGACCTATG AGTTTGAAGC TAAGACCCCC
CTAGGTACTG TCCTAAAAAA ATCCCATGAA GAAGAGGATT TTCTGTTGGA TGATACAGCC
CTGGCGTATA AAGCAAAGGA CGGGTTAGTC ATTATAGTTG GTTGTTCCCA CTCAGGTATT
TGTAATATTG TTGAGTATGC TAAGAAGGTT TGCCAGGATG AGCGGGTGCT AGACATTATT
GGAGGATTTC ATTTGCTAAG TCCACCCCGG AGTCAGATGG ACGGTGTTAA GGATTATCTC
AGGACATTAC AACCAAAGGA AGTACATGCC TGTCATTGTA CGGATCTTCA AGCCAAGATA
GAGTTGTCAG AGGTTGTTAA TTTAAAAGAG GTAGGGGTAG GGTTAAAATT ACAGTATGAT
TGA
 
Protein sequence
MQLTVLVDNN TIIDRYLIGE PGLSFFLETG GKRILFDTGY SDAFIQNAGK IGINLRVLDY 
VVLSHGHMDH TWGLDPLIRL YTEAIIENQA GMLKPVVVGH SDVFYSKRLK GMGEIGSTVA
KSKLSQHFEL KLLKNPLWLT EKLVFLGEIP RTYEFEAKTP LGTVLKKSHE EEDFLLDDTA
LAYKAKDGLV IIVGCSHSGI CNIVEYAKKV CQDERVLDII GGFHLLSPPR SQMDGVKDYL
RTLQPKEVHA CHCTDLQAKI ELSEVVNLKE VGVGLKLQYD