Gene Dred_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2362 
SymbolpurH 
ID4955335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2585601 
End bp2587142 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content50% 
IMG OID640181534 
Productbifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 
Protein accessionYP_001113697 
Protein GI134300201 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 
TIGRFAM ID[TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA AACGCGCTTT AATTAGTGTT TCCGATAAAA CCGGTCTGGT GGATTTTGCC 
AGGGGGTTGG CGAAACTGGG AGTGGAGATT ATCTCCACCG GCGGCACCGC AAAAGTCCTG
CGGGAGGCCA GTGTACCGGT AATTTATATA TCAGATGTTA CCGGTTTTCC GGAAATTTTG
GATGGCCGGG TTAAAACCCT GCATCCCAAT GTTCATGGTG GTATTTTAGC CATGCGGACC
GAAGAACATC TTAGCCAACT TGAAGAACAT AACATTACAC CCATAGACCT GGTGGTGGTA
AACCTTTATC CTTTTCGTGA AACCATTGCC AAACCTGAGG TGACCTTGGA AGATGCCATA
GAAAATATTG ATATTGGTGG GCCCACTATG GTACGGTCCG CGGCTAAGAA CCATGCCTAT
GTGGGGGTTG TGGTCAATCC CCAGCGTTAC GGTCAGGTTC TGGAAGCCTT AGGGGAAAAG
GGAGAACTTA CAGGAGATCA GCGTTTGGAG TTGGCCAGGG AAGCCTTTGC CCACACGGCC
AGTTATGATA CAGCCATTGC CAATTATCTG GGCAGCGTAA GCCAAGCAGA GGCATTTCGT
CCTGAGTTTA ACTTTTCTTT AGTCAAGGTC CAGGACTTGC GCTATGGGGA AAACCCGCAC
CAGAGGGCTG CCTTTTACAA AGATCCCGGC ATTACTGGAC CCTGTATTGC CAATGCCGTT
CAAATTCATG GGAAAGAACT TTCCTATAAT AATATCCTGG ATGCCAACAG CGCCCTGGAA
CTGGTTCGAG AATTTAGTGA ACCCAGTGCA GTTATCATTA AACATAATAA TCCCTGTGGT
ACCGCCACTG CAGAGGATTT GCCAGCGGCT TACCGTAAGG CCTTTGCAGC GGACACTGTT
TCTGCCTACG GGGGTATTGT GGCGGTGAAC CGGACCCTTG ATGGAGATAC GGCCGCTGAA
ATGGCTAAGA TCTTTTTGGA AGCGGTTATC GCACCGGACT TTACTACCGA AGCTTTGGAC
ATTTTGACCA AGAAAGCCAA TCTTAGGTTA CTGAAAACCG GGGAACTAAC GGAGCAAACC
AATGATGTGT TAGAGGTCCG GAAGGTGAAC GGGGGACTTT TGGTCCAGCA GGCAGATCGG
CGGGTGTTGA ACATGGATGA GGTGAAGGTT GTAACCGAAC GCCAACCCTC GCCGCAAGAA
TTAAAGGAAT TAATCTTTGC CATGACGGTG GTTAAGCATG TGAAGTCCAA CGCCATTGTT
CTTTCTAAGG ATGGACAGAT TATTGGTGTT GGGGCAGGCC AGATGAATCG GGTTGGCTCC
GCCCGCATTG CCTTTGAACA GGCCGGCGAA GGGGCCCGGG GGGCTGTCAT GGCCAGTGAT
GCCTTCTTCC CCTTCCGGGA CACCATAGAT GAAGCGGCCA AAGCCGGGGT GAAAGCCGTT
ATTCAACCCG GCGGTTCCAT TCGGGATGAA GAATCCATTC AAGCTTGTAA CGAGCACGGC
ATTGCCATGG TCTTTACCGG CATGCGGCAT TTTAAGCACT AG
 
Protein sequence
MKIKRALISV SDKTGLVDFA RGLAKLGVEI ISTGGTAKVL REASVPVIYI SDVTGFPEIL 
DGRVKTLHPN VHGGILAMRT EEHLSQLEEH NITPIDLVVV NLYPFRETIA KPEVTLEDAI
ENIDIGGPTM VRSAAKNHAY VGVVVNPQRY GQVLEALGEK GELTGDQRLE LAREAFAHTA
SYDTAIANYL GSVSQAEAFR PEFNFSLVKV QDLRYGENPH QRAAFYKDPG ITGPCIANAV
QIHGKELSYN NILDANSALE LVREFSEPSA VIIKHNNPCG TATAEDLPAA YRKAFAADTV
SAYGGIVAVN RTLDGDTAAE MAKIFLEAVI APDFTTEALD ILTKKANLRL LKTGELTEQT
NDVLEVRKVN GGLLVQQADR RVLNMDEVKV VTERQPSPQE LKELIFAMTV VKHVKSNAIV
LSKDGQIIGV GAGQMNRVGS ARIAFEQAGE GARGAVMASD AFFPFRDTID EAAKAGVKAV
IQPGGSIRDE ESIQACNEHG IAMVFTGMRH FKH