| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2354 |
|---|
| Symbol | |
|---|
| ID | 4955564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2573937 |
|---|
| End bp | 2575052 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640181526 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_001113689 |
|---|
| Protein GI | 134300193 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.880639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGGATG TGAAAAAATT GCGTGATTCT TTTAATGTAA CCAAACTCAT TCGCCCGGAT
TTAGAGAAAT TGATACCCTA TGATGCCCAC CTCTACCCCG AGGCCATTAA ACTGGATGCC
AATGAAAACC CCTTTCCCTT TCCTCAAGCA GTGGCCCAAC AGATGGCTGC CCTCGTTGCC
GATGAACTGC TGAGCCGCTA TCCTGATAGT GATGCCATTG AACTACGTAA AGACATTGCA
GAATATGCAG GGGTGTTACC GGAACAGGTG ATGGCGGGTA ATGGTTCTGA CGAGCTAATC
TTAAATATAT TACTAACCTT TGGCACCGGT GGTCGGGTGC TTATCACCAA CCCCACCTTC
GGCATGTATA AAATACATGC TCTGATTGCG GGGGCCAGAC CCATTCCAGT GCCCCGTCGT
AGTGATTTCT CTGTTGACGT ACCTGCCTTG GTGAGTTATG CTCGGAAACC GGAAGCAAGG
GTAATTTTTC TTTGCTCCCC CAATAACCCC ACAGGTAATG CTTCGACCCT AGAGGAAATA
GAAGGTGTGC TGCAGCAGGT AAATTGCCTG GTGGTGGTTG ACCAGGCCTA TCTGGAGTTT
GGTGGAGAAG ACTGTACCCC TCTGTTGAAC CGTTATCCCA ACCTGTTAAT TCTTCGGACC
TTTTCCAAAG CCTTTGCAAC GGCAGGCTTG CGGGTTGGCT ACATGCTGGC TCACCCAGAT
GTATTACGTC AAATAAAGAA GGTCAAACAA CCCTATAATT TAAATTCCTT TTCACAGGCC
GCAGCCAGAG TAGTGTTAAA AAATAAGGAG CACTTTAAAC TGCAAATTCA GGAGATTAAA
GAGCAACGTG AGAAGGTTTA TCAAAATTTA CAAAGTTTAG AAGGAGTAAC ATCTTACCCT
TCAGTTACAA ACTATATCCT TTTCCGAACC AATTATGCCA GTAAAACCGT TTACCAGGGT
TTATTGGAAA AAGGAGTGCT CATCCGTCAA TTGGGCGGTC CGGAATTGCC CGGTTTCCTG
CGCATGTCCA TTGGTACCCC GGAGGAAAAT ACAAAATTTC TGCAAGCCCT AACAGAAGTT
CTTGAGCAAT TAAGGGAGGA AAAAGACAAT TGCTAA
|
|---|
| Protein sequence | MKDVKKLRDS FNVTKLIRPD LEKLIPYDAH LYPEAIKLDA NENPFPFPQA VAQQMAALVA
DELLSRYPDS DAIELRKDIA EYAGVLPEQV MAGNGSDELI LNILLTFGTG GRVLITNPTF
GMYKIHALIA GARPIPVPRR SDFSVDVPAL VSYARKPEAR VIFLCSPNNP TGNASTLEEI
EGVLQQVNCL VVVDQAYLEF GGEDCTPLLN RYPNLLILRT FSKAFATAGL RVGYMLAHPD
VLRQIKKVKQ PYNLNSFSQA AARVVLKNKE HFKLQIQEIK EQREKVYQNL QSLEGVTSYP
SVTNYILFRT NYASKTVYQG LLEKGVLIRQ LGGPELPGFL RMSIGTPEEN TKFLQALTEV
LEQLREEKDN C
|
|---|
| |