| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2353 |
|---|
| Symbol | |
|---|
| ID | 4956206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2573353 |
|---|
| End bp | 2573943 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640181525 |
|---|
| Product | imidazoleglycerol-phosphate dehydratase |
|---|
| Protein accession | YP_001113688 |
|---|
| Protein GI | 134300192 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.11788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTAAACC GTCAAGCTAA ATTCGAACGC AAAACCTCTG AAACCGACAT TTTGGTGGAA
GTTTTTCTGG ACGGTAATGG CAAATATCAG GTGGCAACCG GAGTCGGTTT TTTTGATCAT
ATGCTTTGCT TATTTGCCAA ACACGGGGCC CTTGATCTAA CTGTGAAAGC AGCAGGAGAT
ACTCATATTG ATGATCATCA TACCGTAGAA GATGTGGGGA TCACCTTGGG ACAGTCCATC
AAGCAGGCCC TGGGGGATAA GCAGGGAATC GTTCGCTATG GCCATGCTTT GGTACCCATG
GATGAATCCT TGATTCTAGT GGCTTTGGAT ATGAGCGGCA GGGGTCATTT GGAATTAGAT
TTACCTTTGC CCGCGGCTAA AGTGGGAAAT TTCGATACCG AATTGGTGGA AGAATTTTTT
AGAGCACTGG CCCTGAACTG TGGTATGACC CTTCATGTAC GAATGTTAAG TGGTCGCAAT
ACCCATCATA TTATTGAGGG AGCCTTTAAG GCCCTAGGAA GGGCTTTACG ACAGGCGGTG
TCCAAGGATC AACGGTTAAC AGGTATTCCT TCCACTAAGG GAGTGTTGTA A
|
|---|
| Protein sequence | MLNRQAKFER KTSETDILVE VFLDGNGKYQ VATGVGFFDH MLCLFAKHGA LDLTVKAAGD
THIDDHHTVE DVGITLGQSI KQALGDKQGI VRYGHALVPM DESLILVALD MSGRGHLELD
LPLPAAKVGN FDTELVEEFF RALALNCGMT LHVRMLSGRN THHIIEGAFK ALGRALRQAV
SKDQRLTGIP STKGVL
|
|---|
| |