| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2351 |
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| Symbol | |
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| ID | 4956374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2572003 |
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| End bp | 2572743 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640181523 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001113686 |
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| Protein GI | 134300190 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000151761 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTGT TTCCGGCCAT AGATTTAAAA GAGGGTCAAT GTGTACGTCT TGTGGAAGGG
CGTATGGACA GTGCCACAGT ATACTCCAAT GATCCTGGCA GCATGGCCCG GTTGTGGCAG
GATCAGGGTG CCCAGTACAT CCATGTGGTG GATTTGGATG GTGCCTTTGC CGGTCAACCA
CGTAACCGCC AATCCATTGC CCAAATTGTG CAGGGGGTTC AGGTGCCGGT CCAGGTGGGC
GGAGGTATCC GTGATTTGGA AACCATTGAA GACTTATTGT CCCTGGGAGT TGACCGTGTT
ATTCTAGGCA GTGCAGCCAT TCTAAAACCA GAATTGGTGG CTGAGGCCTG CCGTAAATAT
GGTCAGCGGA TTCTGCTGGG AATTGATGCC AAGGACGGTC AGGTGGCAAT TCAGGGTTGG
GGAGAAACTG TTAAAAGAAC AGCCTTGGAC TTAGCCCTGG AAATGAAACA GTTGGGAATC
GAACGGGCAG TTTTTACGGA TATTAGGCGT GACGGTAAAC TATCTGGACC AAATCTGGCA
GCCACTGGCG AATTGGCCAG GAACAGTGGA CTTAGGGTAA TCGCCTCCGG CGGTGTTGCT
TCTCTGGAAG ATATTCGGCA ATTGAAAAAA TTGGAACAAG ATGGGGTGGA GGGAGCCATC
CTGGGAAAGG CTCTTTATAC CAATGCTGTC AAGTTGCCTG AGGCCCTGGT CATTGCCCGG
GGGGAGGAAT CAGTATGCTG A
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| Protein sequence | MILFPAIDLK EGQCVRLVEG RMDSATVYSN DPGSMARLWQ DQGAQYIHVV DLDGAFAGQP
RNRQSIAQIV QGVQVPVQVG GGIRDLETIE DLLSLGVDRV ILGSAAILKP ELVAEACRKY
GQRILLGIDA KDGQVAIQGW GETVKRTALD LALEMKQLGI ERAVFTDIRR DGKLSGPNLA
ATGELARNSG LRVIASGGVA SLEDIRQLKK LEQDGVEGAI LGKALYTNAV KLPEALVIAR
GEESVC
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