Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2346 |
Symbol | |
ID | 4956696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 2564983 |
End bp | 2566995 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640181518 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_001113681 |
Protein GI | 134300185 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAGATT TAAGCCAACA AAGCAAGGCC CGGGTGGAAG CACTGCGCCG GGAGATAAAC CATCATAACT ACCAGTACTA TGTACTGGAT CAACCTACTA TTACTGACGC CCAGTACGAT CAATTAATGC AGGAATTACT ACGGCTGGAG GAGCGTCACC CGGAGTTGGT AACCCCCGAT TCCCCAACCC AGCGGGTTGG GGGGCAGGTG CAAAGGGGTT TTTCTTCTGT ACCGCATAAA ATACCGATGC TAAGTTTAGG CAATGCCTTT GGTGAAGGGG ATTTGCGGGA ATTTGATCGG CGTGTTCGTT CCTATCTGCC CGGTGAAGAA GTAAAATATG TGGTGGAGCT TAAAATCGAC GGCTTGGCCA TTTCTCTCTG GTACGAGAAG GGCCTGCTGG TCAGGGGTGC TACCCGGGGA GATGGCGAAC TGGGAGAAGA TATTACCATT AATCTAAAGA CCATCAGGGC CATTCCTCTG CGGCTAACGC AGGAAGTTCC CTTTCTAGAG GTCCGGGGCG AAGCCTATAT GCCCAAGGAT TCCTTTGTAC GACTTAATGA AGCCCGGGAG GAAGCCGGGG AACCGCTCTT TGCCAATCCA CGCAATGCGG CGGCAGGTAG TCTACGCCAA TTGGACCCTA AAATTACGGC CGCCCGCAAC CTGAGTGTGT TTATGTATGC CATCGGTTAC ATAGAAGGAG CTAAGCCCCC AAGCCATGCA GAGAGCTTGG CCTGGTTAAA GGAACTGGGA ATTCGCATTA ACCCGGATCA TCAAGTGTGC GGCAGCATCG ACGAGGTTAT TGACTTTATC AGCCAGTGGC AGGCTAAGCG TTACCAGTTG CCCTATGCCA TTGATGGCAT GGTAATCAAA GTGAACTCAT TGGAGCAACA GCAGCGGCTG GGTACAACCA TGAAAAGTCC CCGCTGGGCC ATCGCCTATA AATTTCCCGC TGAGCAAGCC GTCAGCACCA TTAAGGATAT CATCATACGG GTGGGACGTA CCGGTGTATT AACCCCCACA GCCATCCTGG AGCCGGTTCA ACTGGCGGGC ACCACCGTTA GTAAAGCCAC CTTGCATAAT GAAGATATTA TTCGCCAGAA GGATATCCGT ATTGGAGATA AAGCCCTGGT GCAGAAAGCA GGGGATATTA TCCCGGAAAT TGTTCAGGTA TACCCTGAAA AACGAACTGG TAATGAAGTT CCTTTTATCC TACCTGTTAC CTGCCCGGAA TGTGGTGCAG AGGTAGTTCG TGTGGCAGGA GAAGCGGCTC ACCGCTGCAC CAATGAAAAC TGTTCAGCCA AATCCCGGGA GGGCATTATC CACTTTGTTT CCCGCAGTGC TATGGATATT ATGGGGCTGG GGGAAGGCAT TGTGAACCAG CTTATTAAAG GCGGACTGGT GAAGGACCCT GCGGATCTCT ATGATCTGAA ATATGAGGAT CTAATTCGGC AGGAACGAAT GGGAGCCCGG TCTTCTCAAA AACTGCTGGC TGCCATTGAA GCCAGTAAAA ATAATTCCCT GGGTCAGCTT CTGTTTGGTC TGGGCATTCG CCATGTGGGT GAGCGAGCAG CTAAAATTCT GGCCCGCCAA TTTGGTTCTA TGCAAGCTCT GATGCAAGCA ACGGCGGAAG ATTTAACCGG CATTTCGGAA ATTGGTCCTC GTATTGCCGA AAGTATAATG GAATATTTTT CCAGGCAGGA GAACCAAGGT TTGATAGAGC GGTTGTCCAA GGCCGGTGTG AATATGTTGG AAGAGGTTGA ACAGACAGAG TCCACTGATC AGACTTTGAG CGGTAAAACC TTTGTGGTAA CTGGCACACT GGAAGGTTTT TCCCGGCAGG AAGCTCAAAG GGCTATTGAG GAACGGGGCG GTAAAGTTTC CGGCAGTGTC AGTAAAAAAA CCAACTATGT GGTGGTGGGA GAAAACCCTG GTTCCAAGCA TGATAAAGCA CGGCAGTTGG GGATTACTAT ATTAACTGAG CAAGACTTTG TTAAACTATT GCAGCAGCAA TAA
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Protein sequence | MADLSQQSKA RVEALRREIN HHNYQYYVLD QPTITDAQYD QLMQELLRLE ERHPELVTPD SPTQRVGGQV QRGFSSVPHK IPMLSLGNAF GEGDLREFDR RVRSYLPGEE VKYVVELKID GLAISLWYEK GLLVRGATRG DGELGEDITI NLKTIRAIPL RLTQEVPFLE VRGEAYMPKD SFVRLNEARE EAGEPLFANP RNAAAGSLRQ LDPKITAARN LSVFMYAIGY IEGAKPPSHA ESLAWLKELG IRINPDHQVC GSIDEVIDFI SQWQAKRYQL PYAIDGMVIK VNSLEQQQRL GTTMKSPRWA IAYKFPAEQA VSTIKDIIIR VGRTGVLTPT AILEPVQLAG TTVSKATLHN EDIIRQKDIR IGDKALVQKA GDIIPEIVQV YPEKRTGNEV PFILPVTCPE CGAEVVRVAG EAAHRCTNEN CSAKSREGII HFVSRSAMDI MGLGEGIVNQ LIKGGLVKDP ADLYDLKYED LIRQERMGAR SSQKLLAAIE ASKNNSLGQL LFGLGIRHVG ERAAKILARQ FGSMQALMQA TAEDLTGISE IGPRIAESIM EYFSRQENQG LIERLSKAGV NMLEEVEQTE STDQTLSGKT FVVTGTLEGF SRQEAQRAIE ERGGKVSGSV SKKTNYVVVG ENPGSKHDKA RQLGITILTE QDFVKLLQQQ
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