| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2339 |
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| Symbol | aksA |
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| ID | 4957128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2556932 |
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| End bp | 2558065 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640181511 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_001113674 |
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| Protein GI | 134300178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGATAACA GAAAAATTTG GATTGTAGAT ACAACATTGC GTGACGGCGA GCAAACCGCC
GGCGTGGTGT TTGCAAACAG AGAAAAGGTG CGAATTGCAC AGTTTCTCAA TGAACTGGGT
GTTGATCAAA TTGAAGCAGG TATTCCTGTA ATGGGTGGAG ACGAGCAGGA AGCAATTAAA
GAAATTTGCA AACTGGGTCT AAAGTCTAGC ATTATGGGCT GGAATCGCCC GGTGCTTAAA
GATATTGAAT CATCCATAGC CTGCGGAGTG GATGCTGTGG CCATATCCAT TTCTACATCG
GACATTCATA TTAAGCATAA GCTAAAAACC AGTCGTGAAT GGGTTCTGGA GCATATGGTT
CGGGCCACGG AATTTGCCAA AAAGGAAGGC ATGTATATTT CTGTTAACGC AGAGGATGCT
TCCCGTAGTG ATCTGAATTT TTTAATTGAG TTTGCCAAGG CCGCTAAGCA GGCTGGTGCA
GACCGGCTTC GCTACTGCGA TACGGTTGGT ATTTTGGAAC CCTTTACCTG TTATGATAAC
ATTAAAAAGC TAAAGGAAGC AGTGGACATT GAGGTTGAAA TGCACACCCA TAATGACTTT
GGCATGGCAA CAGCCAATGC CTTTGCCGGG GTTAAGGCCG GGGCCAATTG GGTAGGGGTA
ACCATTACAG GTTTGGGTGA ACGAGCTGGT AACTCACCTT TGGAAGAAGT TGTTATGGCC
TTAAAGCATC TCTATGATAT TGACTTGAAT TTTAAAACTG AGATGTTTCG AGAAGTGGCA
GAATATGTTG CCCGGGCCTC TGGCCGGGAA TTACACTGCA GTAAGGCCAT TGTAGGTTCC
AATATGTTTG CCCATGAGTC TGGTATTCAT GCCGACGGGG CCATTAAGAA CCCTAAAACC
TATGAAGCAT TCCAACCGGA AGAAGTGGGC TTGGAACGGC AGATCGTGAT TGGTAAACAT
TCCGGCAGTG CTTCCCTGAG AATGAAGTTT GCCGAGTATG GCATTGACTT ATCCAAGGAA
GAAGCCGAAG AATTATTGCC TAAAATACGT TCTGCATCAG TATCCTTAAA GCGATCCTTG
TTTGATAAAG AATTGGTTTA TATCTATGAA GATCATTTCG GAAAGAGGGA TTAA
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| Protein sequence | MDNRKIWIVD TTLRDGEQTA GVVFANREKV RIAQFLNELG VDQIEAGIPV MGGDEQEAIK
EICKLGLKSS IMGWNRPVLK DIESSIACGV DAVAISISTS DIHIKHKLKT SREWVLEHMV
RATEFAKKEG MYISVNAEDA SRSDLNFLIE FAKAAKQAGA DRLRYCDTVG ILEPFTCYDN
IKKLKEAVDI EVEMHTHNDF GMATANAFAG VKAGANWVGV TITGLGERAG NSPLEEVVMA
LKHLYDIDLN FKTEMFREVA EYVARASGRE LHCSKAIVGS NMFAHESGIH ADGAIKNPKT
YEAFQPEEVG LERQIVIGKH SGSASLRMKF AEYGIDLSKE EAEELLPKIR SASVSLKRSL
FDKELVYIYE DHFGKRD
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