Gene Dred_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2337 
Symbol 
ID4957242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2555164 
End bp2555664 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content38% 
IMG OID640181509 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_001113672 
Protein GI134300176 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC AAGGAAAAAG CCATAAGTTT GATAATGATG TTAATACCGA TTATATAATA 
TCGGGTAAAT ATAAGTTTAA AACATTGGAT ATGAATGAAC TGGCAAAACA TGTTATGGAA
GATTTGGACC CTGATTTTTA CAGCAAGGTT ACTCCCGGAG ATTTTATTGT TGCCGGCAGT
AATTTTGGCT GTGGTTCCTC TAGGGAACAG GCACCTCTGG CCATTAAACA TGCTAATATC
AGTGCTGTTT TAGCCAAGTC CTTTGCCCGG ATTTTTTATC GCAATGCCAT TAATACTGGT
TTGCCGGTGC TGGAATGTGA TACCGATTTA ATTGATCCCG GTGATTTACT GGATGTGGAT
CTAACAAACG GTGTTATCAT TAACCGTACT AAAGATTTAA AAATTTCTGT AAAGCCACTG
CCCCAGGTGA TGATTAAAAT TCTAAATGAT GGGGGATTGG CACCGCACTT TCGAAAATAC
GGTGGTTTCA ACTTTGGTTA G
 
Protein sequence
MKFQGKSHKF DNDVNTDYII SGKYKFKTLD MNELAKHVME DLDPDFYSKV TPGDFIVAGS 
NFGCGSSREQ APLAIKHANI SAVLAKSFAR IFYRNAINTG LPVLECDTDL IDPGDLLDVD
LTNGVIINRT KDLKISVKPL PQVMIKILND GGLAPHFRKY GGFNFG