Gene Dred_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2333 
Symbol 
ID4957364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2549381 
End bp2550595 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content47% 
IMG OID640181505 
Productphage tail protein I 
Protein accessionYP_001113668 
Protein GI134300172 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAGGAA TATACCAGGT CGATCCTTAC CTGCTGCAAT ACCGTACCAA CGTCAAAGGA 
TTTATCGAAG ATCAAGACAA AACCGGCATT TTATTTGAGG AAACTATCTT TTACCCGGAG
GGGGGAGGTC AACCATCCGA TCGGGGAACC CTTGTCTGTG ATGCCCGTCG AACATCCCAT
GAAGTATTGC ATGTGGAACA AAGGCCCGAG GGCATTGTGC ACTGGATTGC CGGGTCCCTG
AAGCCCACCA TAGGTGCCAG TGTGTTATTG ACTGTGGATG CAGAAAGACG GCAAGATCAT
ATGCAACAAC ATCATGGTCA ACACATACTG TCTGCTGTCT TTGAACGTAA TTATGGTTGG
GATACAGTGG GATTTCATTT AGGCCCGGAG ACTTCCACCA TTGACTTAAC TGTGGGGGAC
ATTTCACAGG ATGTATTGCA AGAAGTGGAA CTGGAAGTAA ACCGGATTAT CATGGAAAAT
ATTCCGGTGA AAACAGAATA TTATAAGCGT GAAGATCTTG GGCAGGAATT AATTAAGAAA
CTACCGTCGG ATCAAAATGA AGTACGGTTG GTGGTGATCC CGGGTATTGA TGAAAATGCT
TGTTGTGGTA CTCACCCCCA GCGTACAGGT GAGGTAGGTC CCTGTAAAAT TCTAAAAATA
GAAAAGTTAA GGGGAAACAT AAGGTTGTCC TTTATTTGTG GCGAACGAAC CATTGCATGG
ATGAGACAAA CCGCCGACAC TCTTCACCAG TTAGAGAAGG CTATCGGAGC TTCTGGTAAT
GAAGCCCTTA TTCGGTTAGA AAAAAGAGAA GTGGAGTTGA AGAAACTCCA AAAGGAACGT
AAGGAATTAC TGTCCCTCAA ATATCGTTAT CTGGCTAAGG AGTTGGCAAC GGAGGCCATT
TCCTCGGGTG AAACAAGTAT TCTAATACAA CACTTTTCTG AAGCTGACAT GGAAATGCTG
CGGGGGGTGG CTACCTCCTG GTGTGCCCAG TCGGGCAGGG TGGCTGTACT AATGGGTGGT
ACCGGTCCCT TTGATGTGGT AATGGCCAGG GGTTCAGGGG TAGCAACCTC TATGAACAGT
GTGGCTGCCG AACTATGGCC AGTGCTGGAG GGTAAAGGCG GCGGCAGTGC TGAGCTGGTC
CAAGGCAAGG CTCAGAAATT ACCAGTGGAA CAATTAAAGG AAATGGTTGC CTCAGCCATC
AACCGTAAGC CTTAA
 
Protein sequence
MTGIYQVDPY LLQYRTNVKG FIEDQDKTGI LFEETIFYPE GGGQPSDRGT LVCDARRTSH 
EVLHVEQRPE GIVHWIAGSL KPTIGASVLL TVDAERRQDH MQQHHGQHIL SAVFERNYGW
DTVGFHLGPE TSTIDLTVGD ISQDVLQEVE LEVNRIIMEN IPVKTEYYKR EDLGQELIKK
LPSDQNEVRL VVIPGIDENA CCGTHPQRTG EVGPCKILKI EKLRGNIRLS FICGERTIAW
MRQTADTLHQ LEKAIGASGN EALIRLEKRE VELKKLQKER KELLSLKYRY LAKELATEAI
SSGETSILIQ HFSEADMEML RGVATSWCAQ SGRVAVLMGG TGPFDVVMAR GSGVATSMNS
VAAELWPVLE GKGGGSAELV QGKAQKLPVE QLKEMVASAI NRKP