Gene Dred_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2324 
Symbol 
ID4958125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2542467 
End bp2543195 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content47% 
IMG OID640181496 
ProductLmbE family protein 
Protein accessionYP_001113659 
Protein GI134300163 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTACCG TTAACAAGAT CGATGTATTG GCAATTGGGG CCCATCCGGA TGATATTGAA 
GCAGGGGCCG GGGGTCTTGT GGCAAAATTT GTTCAGCAGG GGCTCAGCGT GGGGCTGCTT
GATCTTACAG CCGGGGAAAT GTCTACTAAC GGAACTCCTG AAGAGCGTCA GAAAGAGGCC
CAAGGTGCTG CTCAGGTGCT AGGAGTAACC TGGCGCAAAT GTCTGGGATT ACCGGATCGA
GAAATTACTC TGATTAAAAA AAACGTAAAG GCTCTGGTAG AAGTGATTCG TCAGAGCAGG
CCCCGTTTAA TCCTTTGCCC TTATTGGGAA GACCGGCACC CAGATCATGT CAATGCTGCC
AGACTTACGA TAGAAGCCCA TTTTGATGCG GGGCTAAAAA AGGTTTGTGA TCATTTACTT
CCCCATCGTG CCAGCCATCT TTGGCATTAT TTTTTGTCCA GAGCAACTGA ACCTCAATTT
GTCGTGGATG TTAGTCATTG CTATGAGATA AAAAGGGCGG CCATTATGGC ACACAAAACA
CAATTTGGCC AGGGACGGGA TATCCAAAAA ACATTTCTGA ACGCTGGTCC CGGTAGTTTT
CTTTCCATAA TAGAAAGTCG GGATTGCTAT TATGGGTCCT TGATGGGATG TCAATATGGT
GAAGGGTTTA TTACGGCAAT TCCTCTGGCC ATTCAAGATC CGACCAGCTT GCTGGGGGTG
AAGGGATGA
 
Protein sequence
MITVNKIDVL AIGAHPDDIE AGAGGLVAKF VQQGLSVGLL DLTAGEMSTN GTPEERQKEA 
QGAAQVLGVT WRKCLGLPDR EITLIKKNVK ALVEVIRQSR PRLILCPYWE DRHPDHVNAA
RLTIEAHFDA GLKKVCDHLL PHRASHLWHY FLSRATEPQF VVDVSHCYEI KRAAIMAHKT
QFGQGRDIQK TFLNAGPGSF LSIIESRDCY YGSLMGCQYG EGFITAIPLA IQDPTSLLGV
KG