Gene Dred_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2281 
Symbol 
ID4955590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2495410 
End bp2496171 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content42% 
IMG OID640181452 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001113616 
Protein GI134300120 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0442752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGAA AAATAATTTG TTTGGACCCG GGCCATGGCG GACAAGATCC CGGTGCCCTG 
GGAAATGGCT TACAGGAAAA GGATATTACA CTGGAGATTG CTAAGAAGAT TATCCAAAGA
CTTGCTGCCT ATGATGTCAC CGTGAAATCA ACCCGGGACA GTGACACCTT TGTTTCCTTA
AGCCAACGGG CGGCCTATGC CAATAATGTA AATGCTGATT ATTTTGTATC CATTCATATC
AACGCTGGAG GCGGCACTGG TTTTGAAAGC TTTATTTATA ACGGAGAAGT AAGCTCCACC
ACCATAAAAA CCCGTCAGGT CTTACACGAT ACTATCATGG CCGATATGCA GAAGTACTAT
ATGATAGATC GGGGTAAAAA AGCAGCAAAT TTTGCCGTTA TTCGAGAAAC CAATATGCCA
GCTATATTAA CTGAAAATCT TTTTATTGAT AATCCGAAGG ATGCATCCCT ACTAAAAAAC
ACTGATTTCA TTAATGATCT AAGCACTGCT ATCACCCATG GGTTGGTAAA GGGACTCAAT
TTAACCCCTC TAACAATTAT TCCAAATCCA ACCCCAGCCC CTTTGCCCAC CAAACCACCT
GTCACACCTC AGCCGCCCGT CTGGAACCCC CAGGCAGAGA TACAGCAGTT AATTGATACA
GGATTACTGG CCAATAACCA TCCAGCTGAC GAACATATAA CTTGGGGGGA GTTTGCAACT
GTTATTAATC GGTTGTTATA CATTATTAAA AATAAATCAT AA
 
Protein sequence
MTRKIICLDP GHGGQDPGAL GNGLQEKDIT LEIAKKIIQR LAAYDVTVKS TRDSDTFVSL 
SQRAAYANNV NADYFVSIHI NAGGGTGFES FIYNGEVSST TIKTRQVLHD TIMADMQKYY
MIDRGKKAAN FAVIRETNMP AILTENLFID NPKDASLLKN TDFINDLSTA ITHGLVKGLN
LTPLTIIPNP TPAPLPTKPP VTPQPPVWNP QAEIQQLIDT GLLANNHPAD EHITWGEFAT
VINRLLYIIK NKS