Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_2281 |
Symbol | |
ID | 4955590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 2495410 |
End bp | 2496171 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640181452 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001113616 |
Protein GI | 134300120 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0442752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGAA AAATAATTTG TTTGGACCCG GGCCATGGCG GACAAGATCC CGGTGCCCTG GGAAATGGCT TACAGGAAAA GGATATTACA CTGGAGATTG CTAAGAAGAT TATCCAAAGA CTTGCTGCCT ATGATGTCAC CGTGAAATCA ACCCGGGACA GTGACACCTT TGTTTCCTTA AGCCAACGGG CGGCCTATGC CAATAATGTA AATGCTGATT ATTTTGTATC CATTCATATC AACGCTGGAG GCGGCACTGG TTTTGAAAGC TTTATTTATA ACGGAGAAGT AAGCTCCACC ACCATAAAAA CCCGTCAGGT CTTACACGAT ACTATCATGG CCGATATGCA GAAGTACTAT ATGATAGATC GGGGTAAAAA AGCAGCAAAT TTTGCCGTTA TTCGAGAAAC CAATATGCCA GCTATATTAA CTGAAAATCT TTTTATTGAT AATCCGAAGG ATGCATCCCT ACTAAAAAAC ACTGATTTCA TTAATGATCT AAGCACTGCT ATCACCCATG GGTTGGTAAA GGGACTCAAT TTAACCCCTC TAACAATTAT TCCAAATCCA ACCCCAGCCC CTTTGCCCAC CAAACCACCT GTCACACCTC AGCCGCCCGT CTGGAACCCC CAGGCAGAGA TACAGCAGTT AATTGATACA GGATTACTGG CCAATAACCA TCCAGCTGAC GAACATATAA CTTGGGGGGA GTTTGCAACT GTTATTAATC GGTTGTTATA CATTATTAAA AATAAATCAT AA
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Protein sequence | MTRKIICLDP GHGGQDPGAL GNGLQEKDIT LEIAKKIIQR LAAYDVTVKS TRDSDTFVSL SQRAAYANNV NADYFVSIHI NAGGGTGFES FIYNGEVSST TIKTRQVLHD TIMADMQKYY MIDRGKKAAN FAVIRETNMP AILTENLFID NPKDASLLKN TDFINDLSTA ITHGLVKGLN LTPLTIIPNP TPAPLPTKPP VTPQPPVWNP QAEIQQLIDT GLLANNHPAD EHITWGEFAT VINRLLYIIK NKS
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