| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2252 |
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| Symbol | |
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| ID | 4955935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2463738 |
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| End bp | 2466965 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640181425 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001113589 |
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| Protein GI | 134300093 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTTT TCAATAATAT TAACAAAATA GTAAAGGACG ACTTAGTACA GGCCATTACA
CCAGGGAGCC GCATCTCCAT TGCCGCTGCC TGTTTTTCCA TTTACGCCTA CCAAGAACTA
AAAAAACAAC TAAGTAATAT CGATTCCCTA CATTTTATCT TTACGTCCCC CACCTTTGTT
ACCGAAAAAT CACCAAAGGA AAAACGTGAA TTCTACATTC CCCGCTTACA CAGAGAAAGA
AGCCTCTACG GCACTGAATT TGAGGTAAAG CTCCGCAATG AATTGACCCA AAAGGCGATT
GCTAAAGAAT GTGCCGAATG GATTCGTAAG AAGGTCCGCT TTAAATCCAA CTCCACCCAG
GAAGGGATGG GCGGGTTCCT CAACATACAT ACCGGTGCTC AGCAACTGAC CTATATGCCC
ATAAATGGCT TTACCACCGT TGATATCGGC TGCGAGCGGG GTAACAATAT TCACAACATG
GTCACCAAAA TGGAGGCCCC CTTCAGCAAT GAATTCGTGC ACCTGTTCGA TAGCGTCTGG
AATGACGAAA ATCGGCTGCA GGATGTAACC GAAGAAGTGA TCGAATACAT TTCTGCTGTT
TACCAGGAAA ATTCCGCCGA ACTCATTTAT TTCCTAACCC TGTATAACAT TTTTAATGAG
TTTCTGGAGA ACATTTCCGA AGATGTCCTG CCCAACGAAG CCACCGGCTT TAAGGAAAGT
ATCATTTGGA ATAAGCTCTA CAACTTTCAA AAGGATGCGG CCCTGGCCAT CATTAATAAA
CTGGAGCAGT ACAATGGTTG TATCTTAGCC GATAGCGTTG GTTTAGGAAA GACCTTTACC
GCCCTGGCAG TGATCAAATA CTACGAAAAC CGCAACAAAA GCGTACTGGT GCTGTGCCCT
AAAAAACTAA AGGACAACTG GCTGACCTAC CGGGGCAACC TTATCAATAA CCCCCTGGCC
AAAGACCGCC TGCGGTATGA CGTACTTTTC CATACCGATT TATCCCGGGA GCGGGGGGAT
TCTGTCATCG GCCTGCCCCT GGACCGTATC AACTGGGGCA ACTACGATCT GGTGGTCATT
GATGAATCCC ATAACTTCCG CAACGGCGGT GCCATCTCCG GTGAGGATGG CGAAAAGGAA
AATCGCTACC TGAAACTACT TAATAAAGTG ATCCGTCCCG GTGTCAAAAC AAAGGTCCTA
ATGCTTTCTG CCACCCCGGT GAATAACCGT TTCTATGATC TGCGCAACCA ATTGGCATTG
GCCTATGAAG GGAAAGCGGA AATCATCAAT GAAAAGCTGG ATACCAAGAC CGATATCGAT
ACCATTTTTC GCATGGCCCA AAAGGTCTAT AACGCCTGGT GCAAGGAACC CCCAGAACTT
CGCACCACCG CTTCTCTATT GAAACAGTTG GACTTTGACT TCTTCGAGGT GCTGGACAGT
GTGACAATTG CCCGCTCACG CAAGCACATA AAGCGTTACT ACGACACCAC GGAAATTGGT
AATTTCCCAG AACGCAACAA ACCCATTTCC CTGCGTACCA AACTGACCAC CTTAAACAAT
GCCATTAACT ATGAACAGGT CTATGAACAA CTATCGCAGC TCAACCTGTC CATTTATACG
CCAACTAACT ATATCCTGGC CAGCAAGCTC AGCAAATACA TAGACCTGGA TTCCGAACAC
AGCAGACGGC TGTCCCAGAG TGGACGTGAA GAAGGCATTC GCCGTTTGAT GAGTATTAAT
TTACTCAAAA GGATGGAAAG CTCTGTGAAT TCCTTTAAAC TAACCGTACG TCGTATCTAT
GAGCAAATCT ATGATACCTT AAAAATCATT GAAAACTATC AGCCCGGTTT AGAAGTAACG
GTACGGGATA TGGGTGATTT CGGGGAGCTG GACCTGGATG ATCAAAATAT CGATATGTTT
AATGTGGGTA AGAAATTTAA AATTGACCTA CGGGATATGG ACTACCTATC CTGGCAGCGG
GAATTAGCCG CCGATTTAGA GATATTGGAG TTACTCATCC TGATGGTGGG CGATATCACC
CCCCAATATG ATTCAAAGCT CAATGAACTA CTACAAGTGA TCGAGAGGAA AATTCAGAAC
CCCATTAACC GGGATAACAA AAAGATTCTC ATATTCACGG CTTTCTCTGA TACAGCGGAG
TACCTCTACG AAAATGTCAG TGCGTATGTC AAAACCAAGT TCGGCTTAAA CAGCGCCTTA
ATCACCGGGG ACATTGAGGG AAGAACCACC ATTCCCAGAT TCCGCAACGT CATGAATGAC
ATTTTGACCT GCTTTTCGCC CATCTCCAAA GAAAAGGCCC TGGTGATGCC GCAGGATAGG
AACGAGATTG ATATACTCAT AGCCACCGAC TGTATTTCAG AGGGACAGAA CCTGCAAGAT
TGCGATTACT GCATCAATTA CGATATTCAC TGGAATCCGG TGCGCATCAT TCAGCGTTTT
GGACGGATAG ACCGTATTGG TAGTAAAAAT GCCGTCATCC AGTTGGTCAA CTTCTGGCCG
GATATCACCC TGGATGATTA TATCAACCTG AAAAGCCGGG TGGAAGCCAG AATGCGCATT
TCTGTTATGA CGGCCACCGG CGATGATGAT TACCTGAACC CCGAAGAAAA GGGTGACTTG
ATTTACCGCA GGAAACAATT AGAAAAACTA CAAAATGAAG TGGTGGACCT AGAGGACATG
ACCAGCGGCA TCTCCATTAT GGATTTGGGT CTCAACGAAT TCCGCATGGA CCTGCTGGCC
TATCTGAAAG CCAATCCCCA GTTAGAACGT ACACCAAACG GCATCCATGC CGTGGTGCGG
GGTGAAAAGC CCGGCGTCAT TTTTGTGCTG AAAAACGTCA ATAAAATGAT TAATGTTGAA
AATCAAAACC GCCTGCACCC CTTTTATATG GTCTACATTG GCGATGATGG GGAGGTTATT
TGCAACCATC TGGAACCCAA AGCCACCCTG GATATGCTAC GGCATCTCTC CCGGGGTAAA
ATAAAGCCCG ACATGGAGGC CTGCCAGATC TTCAATCGAG CCACGAGCGA TGGCAAAAAG
ATGGACCGGG TATCCAGCCT GCTCCAGCAG GCCATTGCTT CTATTATTAC CGTGAAGGAA
GAAAGCGATC TAGACAGCTT TTTTGGCACC GGCCAAACCA CCTTCCTCAC CGGTAACATC
TCCGGCCTGG ATGACTTTGA ACTGATTTGC TTTATGGTGG TGATTTAG
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| Protein sequence | MEVFNNINKI VKDDLVQAIT PGSRISIAAA CFSIYAYQEL KKQLSNIDSL HFIFTSPTFV
TEKSPKEKRE FYIPRLHRER SLYGTEFEVK LRNELTQKAI AKECAEWIRK KVRFKSNSTQ
EGMGGFLNIH TGAQQLTYMP INGFTTVDIG CERGNNIHNM VTKMEAPFSN EFVHLFDSVW
NDENRLQDVT EEVIEYISAV YQENSAELIY FLTLYNIFNE FLENISEDVL PNEATGFKES
IIWNKLYNFQ KDAALAIINK LEQYNGCILA DSVGLGKTFT ALAVIKYYEN RNKSVLVLCP
KKLKDNWLTY RGNLINNPLA KDRLRYDVLF HTDLSRERGD SVIGLPLDRI NWGNYDLVVI
DESHNFRNGG AISGEDGEKE NRYLKLLNKV IRPGVKTKVL MLSATPVNNR FYDLRNQLAL
AYEGKAEIIN EKLDTKTDID TIFRMAQKVY NAWCKEPPEL RTTASLLKQL DFDFFEVLDS
VTIARSRKHI KRYYDTTEIG NFPERNKPIS LRTKLTTLNN AINYEQVYEQ LSQLNLSIYT
PTNYILASKL SKYIDLDSEH SRRLSQSGRE EGIRRLMSIN LLKRMESSVN SFKLTVRRIY
EQIYDTLKII ENYQPGLEVT VRDMGDFGEL DLDDQNIDMF NVGKKFKIDL RDMDYLSWQR
ELAADLEILE LLILMVGDIT PQYDSKLNEL LQVIERKIQN PINRDNKKIL IFTAFSDTAE
YLYENVSAYV KTKFGLNSAL ITGDIEGRTT IPRFRNVMND ILTCFSPISK EKALVMPQDR
NEIDILIATD CISEGQNLQD CDYCINYDIH WNPVRIIQRF GRIDRIGSKN AVIQLVNFWP
DITLDDYINL KSRVEARMRI SVMTATGDDD YLNPEEKGDL IYRRKQLEKL QNEVVDLEDM
TSGISIMDLG LNEFRMDLLA YLKANPQLER TPNGIHAVVR GEKPGVIFVL KNVNKMINVE
NQNRLHPFYM VYIGDDGEVI CNHLEPKATL DMLRHLSRGK IKPDMEACQI FNRATSDGKK
MDRVSSLLQQ AIASIITVKE ESDLDSFFGT GQTTFLTGNI SGLDDFELIC FMVVI
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