Gene Dred_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2239 
Symbol 
ID4957835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2447855 
End bp2448736 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content42% 
IMG OID640181413 
Productinner-membrane translocator 
Protein accessionYP_001113577 
Protein GI134300081 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGTTT TTTTTCAACA ATTGATTAAC GGTATATCCC TAGGGAGCAT CTATGCCCTC 
ATAGCACTGG GCTATACCAT GGTCTATGGT ATAGTTCAAT TAATAAACTT TGCCCATGGT
GATATTTATA TGGTGGGTGC CTACCTTGGC TTCTTTGCCA CAGCCATCCT AGGTTGGTCT
TTTATACCTG CATTATTATT GGCCATGATT GTCTGTGCTA TTCTAGGGGT CGTCATAGAA
AAGCTAGCCT ATAAACCGCT GCGTAATTCA CCTAGAATTG CCGCCTTAAT TACCGCCATT
GGTGTTTCAT TATTTCTAGA GTATGGCATG ATGTTGCTAG TAAAACCAGA TGTTCGTACC
TTTCCCCAGG TGTTATCTGA AGTGCAATAT AAGCTGTTTG GTAATTTGGT AATTACAAAC
AGACAAATAA TTATTTTAGT TATTACAGTT GTTCTAATGC TGTTATTACA GTACATCGTT
CACAAAACCA GAATGGGGAA AGCAATGCGT GCAGTTTCCT ATGATAAACA AGCAGCGCAG
TTAATGGGTA TCAACGTTAA TAATACAATT TCCTTTACCT TTGCCATAGG TTCCTCCTTG
GCAGCTGCAG CAGGTGTATT GGTAGGCATT TACTACAATG CCATTAACCC GTTAATGGGT
ATTATGCCAG GTTTAAAGGC CTTCGTAGCT GCTGTTTTAG GTGGCATTGG CATCATCCCC
GGAGCTATGG CTGGTGGATT TTTGTTGGGT ATTGTGGAGG CCATGGTCAG CGGTTATGGT
AAATCCTTGT ACCGTGATCC TGCTGCCTTC ATCATTCTAA TTATTATCCT CATAGTCTTG
CCCGCCGGCT TGTTTGGCAA GAATGTCCGG GAGAAAGTGT AG
 
Protein sequence
MEVFFQQLIN GISLGSIYAL IALGYTMVYG IVQLINFAHG DIYMVGAYLG FFATAILGWS 
FIPALLLAMI VCAILGVVIE KLAYKPLRNS PRIAALITAI GVSLFLEYGM MLLVKPDVRT
FPQVLSEVQY KLFGNLVITN RQIIILVITV VLMLLLQYIV HKTRMGKAMR AVSYDKQAAQ
LMGINVNNTI SFTFAIGSSL AAAAGVLVGI YYNAINPLMG IMPGLKAFVA AVLGGIGIIP
GAMAGGFLLG IVEAMVSGYG KSLYRDPAAF IILIIILIVL PAGLFGKNVR EKV